Aristophania vespae: GT348_01180
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Entry
GT348_01180 CDS
T06386
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bomb
Aristophania vespae
Pathway
bomb02024
Quorum sensing
bomb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bomb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT348_01180 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT348_01180 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bomb03019
]
GT348_01180 (hfq)
03036 Chromosome and associated proteins [BR:
bomb03036
]
GT348_01180 (hfq)
Messenger RNA biogenesis [BR:
bomb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GT348_01180 (hfq)
Chromosome and associated proteins [BR:
bomb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GT348_01180 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Herpes_U55
MP
GLMA_C
Motif
Other DBs
NCBI-ProteinID:
QHI95091
UniProt:
A0A6P1NJP9
LinkDB
All DBs
Position
255557..255817
Genome browser
AA seq
86 aa
AA seq
DB search
MSSPILDSVQDIFLQHLIAHEEPVTVFLVNGVKLQGIVVLYDAHTLLLRREGHVQLVYKN
AISTIMPIAALANFIVSIEDNTEDHL
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacctatattagattcagtacaagatatatttttacagcatctcatcgcacat
gaagagcccgttacggtctttttagtgaatggcgttaagctacagggaatcgtagtgtta
tatgacgcccatacgcttttattaagacgcgaagggcatgtgcagcttgtatataaaaat
gcaattagcactattatgcctatcgcagccttagctaattttattgtctctatagaagat
aatacagaggatcatctttga
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