Aristophania vespae: GT348_06865
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Entry
GT348_06865 CDS
T06386
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bomb
Aristophania vespae
Brite
KEGG Orthology (KO) [BR:
bomb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bomb03019
]
GT348_06865 (hrpB)
Enzymes [BR:
bomb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GT348_06865 (hrpB)
Messenger RNA biogenesis [BR:
bomb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GT348_06865 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
CON_HrpB
ResIII
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QHI96424
UniProt:
A0A6P1NIR5
LinkDB
All DBs
Position
complement(1530548..1533007)
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AA seq
819 aa
AA seq
DB search
MLTESSLPVEETLPALLKSLQTNPNLVLMAPPGAGKTTLVPPYLLAHEPNWLAGKKIILV
EPRRVAVRGAAARMAFLRGEDPGEFIGYCTRLEQVVSAKTRIEVMTEGLLLRRLLSNPLL
EDVGVVIFDEVHERSLNSDIAIALCLDIQKNFRPDLRIVAMSATLETDVFTELLKAPLLQ
SQGRQYPVTVRFERDIAHLKDLPALCARVIHRMWNDEAGSILVFLPGIGEIRRCAALLDS
KLPVYFLYGEQSPQEQQKALDPEKGRRIVLATSIAETSVTVPGVHIVIDGGWRRSPRRDP
NTGLSRLITHRISRATAEQRAGRAGRQGPGIAVRLWSEMTQRRLLLQDSPEIKDADLSDF
ALITSSWRHVMGTDPLTLPLIEMPPSGALEAAQHLLKLLGALDKNGSLTPLGHKMIGVGT
HPRLAAMLCSAETDSEKITASCLAALLEERDPLGRVDDKTNITTDIRFRLALFAQNDRRV
PGYVMQHLRHIAKRYMRRLKVKDTDFSLIEDEKIPFLVAAGFPDRVAQQAGDIGRYRLAG
GGSARLSVTDPLSRESLLVAIGIHAKRSHEITMATALKRDDLPSCLQQQLIEKRDLAFDT
NSGRVWARQKLCLGSLVLKDKNIPASEEEALELFLERLKSDFKKLLTWDDKVCQLQARIH
LARLYFAPDLPDLSDEALLQDSEWLKPWLIGFCKLSQFKELDLTHILQSFLSYEERQILD
KHLPPFLTLKGRQHTIDYTAPVPSVSARAQSFYGLKSLPIIARGKVSLQAILLSPAGRPQ
AITTDLEAFWKNGWLDLLKEMRGRYPKHNWPEDPSSIIS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgagtcttcacttcctgtcgaagaaacacttcctgcacttttaaaaagcctt
caaactaatcctaatcttgtgcttatggcgcctccaggtgccggtaagacaacgctagtt
cctccttaccttttagctcatgagccaaactggcttgcaggtaagaaaataatcctcgtt
gagcctagacgtgttgctgtacgaggtgcagcggcgcgtatggcttttttgcgaggagag
gatcctggcgaatttattggatattgcacacgtttggagcaggtcgtttctgctaaaacg
cgcatagaagtgatgacagagggattattattaaggcgcttattaagtaatccacttctt
gaagatgttggtgttgttatttttgatgaggtacatgagcgctcattaaatagcgatata
gcgattgctttatgccttgatatacaaaaaaattttcgtcctgatttaagaatagtggct
atgtctgccactttggaaactgatgtttttaccgagcttctaaaagcacctcttttgcag
agtcaggggcggcagtaccctgttaccgttcgttttgagcgtgatattgcgcatttgaag
gatcttcctgctttatgcgcgcgtgttattcatcgaatgtggaacgatgaagcgggttct
attttggtgtttttacccgggataggagaaatcaggcggtgtgcggccttacttgactct
aagttacctgtttattttctctatggggagcaatcgccacaagagcagcaaaaggccctg
gatcctgaaaaggggcgacgcattgttttagcaacatccattgctgaaacctctgttaca
gtgccgggtgttcatattgtcatagatggaggttggcggcgctctcctcgacgtgaccca
aatacgggtttatcacgtcttataactcatcgtatttctcgtgccacagcagagcagaga
gctgggcgcgcgggccgtcaggggcctggaattgctgtacgattatggtctgaaatgacg
caacgccgccttttattacaggatagtcctgaaataaaagacgctgatttaagtgatttt
gctcttataacatcgtcctggcggcatgtaatgggtacagaccctcttacattacctctt
attgaaatgccgccatcaggagctttggaagcagctcagcatttgttaaaattactgggt
gctttagataaaaacggttccctaacacccttaggtcataaaatgataggggttggtact
catccgcgtcttgcagccatgctctgctctgctgaaacagattcagaaaaaattacagcg
tcatgtcttgctgccttgttagaagaacgtgatcctctaggacgagttgatgataaaacg
aatatcacaaccgatatcagatttagattagcactttttgcacagaatgatcggagagtt
cctggctatgttatgcagcatctgcgtcatatagcaaaacgttacatgcggcgcttaaaa
gtgaaagatactgatttttcacttatagaggatgaaaaaattcctttcttagtggctgcc
gggtttcctgatagagtggcgcagcaggcaggagacatagggcgctatcgtttggcagga
ggagggagcgcccgcctttctgtgacagatcctctatctcgtgaatcattactggttgct
ataggaattcatgccaaacgctctcatgaaataaccatggctacagcgttaaagagagat
gatttaccgtcttgtttacagcagcaattgatcgaaaaacgcgaccttgcgtttgataca
aattcagggcgtgtctgggcacgtcaaaaattatgtttgggttctctggttttaaaagac
aaaaacattcctgcttcggaagaggaagcacttgagctgtttttagagcgtcttaaaagt
gattttaaaaaattactgacgtgggatgataaggtctgtcaattgcaggcccggattcac
cttgcacgactttattttgccccagacttgcctgatctttctgatgaggctctcttgcaa
gattcggaatggctgaaaccttggctaataggtttttgcaaattatctcagtttaaagaa
cttgaccttacgcacattttacaaagttttttgagctatgaggagcgtcagatattagat
aagcatctccctccttttttaactttaaaaggccgccagcacactattgattatacggcc
cctgtgccctcagtctcagcgcgtgcccagtctttttatgggttaaagtctttgcccata
attgcacggggcaaggtgtctcttcaggccattttgctctcacctgctggtagacctcag
gcaattacgacagatttagaagctttttggaaaaatggatggttagatttgcttaaagag
atgagagggcgttacccaaagcataattggccagaagatccatcgtcgatcatctcataa
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