Aristophania vespae: GT348_08450
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Entry
GT348_08450 CDS
T06386
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bomb
Aristophania vespae
Pathway
bomb00521
Streptomycin biosynthesis
bomb00523
Polyketide sugar unit biosynthesis
bomb00525
Acarbose and validamycin biosynthesis
bomb00541
Biosynthesis of various nucleotide sugars
bomb01100
Metabolic pathways
bomb01110
Biosynthesis of secondary metabolites
bomb01250
Biosynthesis of nucleotide sugars
Module
bomb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bomb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GT348_08450 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GT348_08450 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GT348_08450 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GT348_08450 (rfbB)
00525 Acarbose and validamycin biosynthesis
GT348_08450 (rfbB)
Enzymes [BR:
bomb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GT348_08450 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QHI96249
UniProt:
A0A6P1NFB1
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Position
complement(1886413..1887468)
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AA seq
351 aa
AA seq
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MHILLTGGYGFIGSAVIRHLINKTSHTVLNVDCMTYAASAENLSSIEQSSRYQHERVDIV
NVSELHRLFATYKPDAVMHLAAESHVDRSIDDPAIFIQTNIIGTYMLLEASRKYWNNLEA
EKKNSFRFHHISTDEVFGHLDIEAPAFTEQSPYDPRSPYSASKASSDHLVRAWHSTYGLP
AFVTNTTNNYGPWHFPEKLIPLIIIKALKGQPLPVYGKGSNIRDWLFVEDHAEALVRAIE
RGVPGETYAISGRQPCSNLEVVKKICAILDELKPDPAGPRERLINFVSDRPGHDFRYEIN
PTHAEQALEWKAAHNFDMGLRKTINWFLENENWWQNILDKRYTGQRLGTRS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttactgacgggtggctatggttttatcggctctgctgtaatacgtcacctc
attaacaaaacatctcacactgttcttaatgtcgattgcatgacatatgctgcttcggct
gagaatctttcatctattgagcagagctcacgctatcagcatgaacgcgttgatattgtt
aatgtcagcgaattacaccgtctttttgcaacttataaaccagatgccgtcatgcatctt
gctgctgaaagtcatgtagatcgttcaattgatgatccagcaattttcattcaaaccaat
atcatcggcacatacatgcttcttgaagcgagccgtaaatactggaataatctcgaagca
gagaaaaagaactctttccgttttcatcacatctctaccgatgaagtctttggccatttg
gacatagaagcgccagcttttacggaacaatcaccctatgatccccgtagtccatattca
gccagcaaggcctcttcagaccatctggtaagagcctggcatagtacttatggtctcccc
gcatttgtaaccaacacaaccaataattacggcccgtggcattttcctgaaaaacttatc
ccactcattattataaaagccctcaaagggcagcctcttcccgtttatggcaaagggagc
aatattcgcgattggctttttgtcgaagatcacgcagaggctcttgttcgtgccattgaa
cgtggcgttccgggcgaaacttatgccattagtggccgccaaccatgctcaaatcttgaa
gttgttaaaaaaatctgtgctattctggacgagttaaaacccgatccggcaggaccgcgt
gaaagacttataaatttcgtttctgaccggcctggtcatgacttccgttatgaaattaac
ccaacccatgcagagcaagctctcgaatggaaggccgctcataactttgatatgggcttg
cgcaaaacaattaactggttcctcgaaaatgagaactggtggcaaaatattctcgataaa
cgttacacaggtcaaaggttgggtacgaggtcatga
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