Cytobacillus oceanisediminis: A361_01935
Help
Entry
A361_01935 CDS
T04330
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03420
Nucleotide excision repair
bon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A361_01935
03430 Mismatch repair
A361_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_01935
Enzymes [BR:
bon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A361_01935
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A361_01935
MMR (mismatch excision repair)
Other MMR factors
A361_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AND37954
UniProt:
A0A160M6V7
LinkDB
All DBs
Position
364487..366718
Genome browser
AA seq
743 aa
AA seq
DB search
MQFLTNKLLNGLNPQQQNAVKTTDGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMRDRIHNMMGGAADEIWISTFHSMCVRILRRDIDRIGYNRNFTILDSTD
QQSVIKSILKDKNLDPKKFDPRAILGSISSAKNELITPEEYAKTAGDYIQQVASDVYTEY
QKRLRRNQALDFDDLIMITIQLFQRVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFKNLCVVGDSDQSIYKWRGADIANILSFEKDYPNAQTIMLEQNYRSTKRILLAANEVI
SKNLNRKPKNLWTENAEGNKIFYYRADSEQGEAQFVAGKIKEYISSGKRSFSDIAILYRT
NAQSRVMEEVLLKSNIEYSIVGGIKFYDRKEIKDILAYLRLIANPDDDISLQRVINVPKR
GIGSGSVDKIANFAQLHEMSMFEALESIELIGLSPKITKGAIEFRDLVKNYTQMQEYLSV
TELVEELLEKSGYRDMLIAEKSIEAQSRLENIDEFLSVTKNFEEASEDKSLIAFLTDLAL
VADIDKLDDDGEKAESVVLMTLHSAKGLEFPVVFLLGLEEGVFPHSRSLMEESEMEEERR
LAYVGITRAEEELYITNAQMRTLFGRTNMNPPSRFIKEIPADLLDGLEPAKKPSPFGSSP
FGSPSASRGAQPQRKAVVRPSASNTGGDEIDWKVGDKAQHGKWGTGTVVSVKGSGEGTEL
DIAFPKPVGIKRLLAKFAPITKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacgaataaattattgaacggactgaatccgcagcagcaaaatgcggta
aaaacaactgacggaccacttcttataatggcaggagcaggaagcggaaagacaagagtg
cttacccacaggattgcttacttgatggtagaaaagggtgtgaacccctacaatattctg
gcaatcacttttacaaacaaagcagcccgtgaaatgcgtgaccgtattcataacatgatg
ggcggagctgcagatgaaatctggatttcgacgttccactccatgtgcgttcgaatctta
agaagagatattgaccgtattggctataaccgcaatttcacgattcttgattcaacagat
cagcaatcggtgattaaatcaatcctcaaggataaaaacctggatccaaagaaatttgat
ccgcgtgctatcctggggtctatcagctcggcaaaaaatgaattgattacccctgaagag
tatgcgaaaacagcaggagattatattcagcaggttgcaagtgatgtatatacagagtac
caaaagagactaagacgcaaccaggcgcttgattttgatgatcttattatgatcacgatt
cagctgttccagagagtgccggaagtgcttgaatattatcagcgcaaattccagtatatt
catgtggatgagtaccaagatactaacagagctcagtatatgctggtcaagcttttggca
agccgtttcaagaatctgtgtgtggtcggtgattccgatcagtccatctataaatggcgc
ggtgcggacatagccaacatcctttcttttgaaaaggattatccaaatgcacagactatt
atgctcgaacaaaattaccgatcaactaaaaggattctgctggctgcgaacgaagtcatc
agcaagaacctcaacagaaagccaaaaaacctttggactgaaaacgcagaaggcaataag
atcttctactatcgtgccgacagcgagcagggagaagcgcagtttgttgcagggaaaatt
aaagaatacatcagcagcggcaagcgaagcttttcggatattgctatcttgtaccgcaca
aacgcacagtcccgtgtaatggaggaagtactgttaaagtcgaacattgaatattccatt
gtcggcggtatcaagttctacgaccgcaaagaaattaaggacatccttgcttacctgcgt
ctgattgcaaatccggatgatgatatcagccttcagcgtgtcatcaatgtgccaaaacgc
ggaatcggctccggttccgttgataaaatcgccaactttgcacagcttcacgagatgagc
atgtttgaagctcttgagtccattgaactgattggcctgagcccgaaaattacaaaaggg
gctattgaattcagggatttggttaaaaactatacacaaatgcaggaatacttatctgtg
acagaacttgtggaagagctgctggagaaatcaggctaccgggatatgctcattgccgag
aagtccattgaagcccagagccgtctggaaaacattgatgaattcctatctgttacaaaa
aactttgaagaagccagcgaagataaatcgcttatcgcatttttgactgatctggctctt
gtggctgacattgataaattggatgatgatggggaaaaagctgaatcagttgtgcttatg
acacttcactcagcaaaagggctagagttccctgttgtctttttactaggtcttgaagaa
ggtgtattcccgcacagccgttctctaatggaagaatcggaaatggaagaggagcgccgt
cttgcttatgtgggaatcacgcgggcagaagaggagctttacattacgaatgcacaaatg
cgtactttatttggacgcacgaatatgaatccgccatcccgatttatcaaagaaattcct
gctgatttgctggatgggcttgaacctgctaaaaagccgtctccatttggatcatccccg
tttggatctccttcagcttcaagaggagcacagcctcagcggaaagcggtggttcgtcca
tctgcatcgaatacaggcggagatgaaattgactggaaagtcggcgacaaagcccagcac
ggaaaatggggtacaggtacagttgtcagtgtaaaaggttccggcgaaggaacagaactg
gatattgcgttcccaaaaccagttggcattaaacgtctgctggccaaatttgcaccgatt
acaaaggcgtaa
DBGET
integrated database retrieval system
