Cytobacillus oceanisediminis: A361_04055
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Entry
A361_04055 CDS
T04330
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A361_04055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bon03000
]
A361_04055
Transcription factors [BR:
bon03000
]
Prokaryotic type
Helix-turn-helix
Other families
A361_04055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_12
TPR_10
TPR_1
TPR_7
HTH_3
TPR_MalT
TPR_SusR
TPR_6
TPR_17
TPR_19
RMD1-3
ARM_TT21_C
TPR_NPHP3
HTH_19
RPN7
ANAPC3
DUF846
ARM_TT21
Med11
uS15_N
Motif
Other DBs
NCBI-ProteinID:
AND38323
UniProt:
A0A160M7V2
LinkDB
All DBs
Position
complement(756217..757491)
Genome browser
AA seq
424 aa
AA seq
DB search
MQIRNSEIDFGKLVFYTRTKKEMTQQELSLGICSITYLSKLENSKIDPNEETLALLLKRL
DIDIHDIHHNNLDIIQNLELWYLSIIKRDEPELIEQLKEINDSVIKNVYSTDLIFYSYLV
KLRYYIHRKKKNEATTVLETLTKSKEKLNQHQSAYFTYLHGLYLCTILLDFPKGLEYFEN
IIYFFNDPQHEDPEFFYHLSLTYTKTYNTRMAVTYVEKALTIFNSKLFFKRSLECQLLLG
VNLGRLKEYNRAIEILTQITEVAPGLDEKLTFAKALHNLGYLYSKIGRFNEAIDYYLKTL
KYTDSQTDFYLNTIIELSTVLKENNRLKEAKEWIELAFKEYKPSNEQSSKLIQLKVLEFQ
ISKNTDELIDFLENTAIPCFLEINEFGLLSKYYELLGNIYKRLHQYKKSSYYFESCLHLQ
KKMS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaggaactccgaaatagactttggaaagctggtgttttacacaaggacaaaa
aaagagatgactcagcaggaattatccttggggatctgttccatcacttatttaagcaaa
ctagaaaattctaagattgatccaaatgaagagaccttggccttgctgctaaagaggctg
gatattgatatccacgatatccatcataataatcttgacatcatccaaaaccttgaatta
tggtacctttcgattataaaaagggatgagccagaattaattgagcaactgaaagagatt
aatgattcagtgatcaagaacgtatattcaacagatctcattttttattcttacctggtg
aagttacgctactatattcataggaaaaagaaaaatgaggcaaccactgtactagagaca
ctaaccaaaagcaaggagaagttaaatcagcaccaaagcgcttacttcacctacttacat
ggtctttatttatgtactattctgttggattttccaaaaggcctcgagtactttgaaaac
ataatttacttctttaatgaccctcagcacgaagatcctgagtttttctatcatctgtct
ttgacctacacaaaaacgtacaatacaagaatggcagtgacttatgtggaaaaagctcta
actatctttaacagcaaattgttttttaaacgaagcttggagtgccagctgcttttagga
gtaaacctaggtcggcttaaagagtataatagggctattgaaattctaacccagattacc
gaagtcgctccaggcttagacgaaaagttaacttttgccaaggctctccataatctcggc
tatttgtatagtaagattggaagatttaatgaagctattgattactatctgaaaactctt
aaatacaccgattcacaaacagatttttatctcaatacaataattgaactttcgactgtt
ttaaaagaaaataaccgacttaaagaagcaaaagagtggatagaactagcctttaaagag
tacaaaccatccaatgaacaatctagtaagctaatccaattaaaagtattggaattccaa
atctcaaaaaacactgatgagctcattgattttttagaaaacaccgcaattccttgtttt
ttagaaataaatgaatttggtttgctttcaaagtactatgaacttttggggaacatctat
aagagactgcatcaatacaaaaaaagtagctattattttgaatcctgtttgcaccttcag
aaaaaaatgtcctag
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