Cytobacillus oceanisediminis: A361_06500
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Entry
A361_06500 CDS
T04330
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03420
Nucleotide excision repair
bon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A361_06500
03430 Mismatch repair
A361_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_06500
Enzymes [BR:
bon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A361_06500
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A361_06500
MMR (mismatch excision repair)
Other MMR factors
A361_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
DEAD
AAA_11
ResIII
AAA_30
nSTAND3
NACHT
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AND38771
UniProt:
A0A169FHL7
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All DBs
Position
1262411..1264678
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AA seq
755 aa
AA seq
DB search
MPSEFEHPDFQQETQRLEFTKRYIDVVIKTSESSKDKFQENMKEAFEDVDWLESSLSYSS
LLTNARFFEMSKDELKQLKKARKKPYFARIDFLREDLNEKEILYIGKTSLYSRENQEQII
VDWRSPIANLYYEGRLGEVQYHSYEESFTGHLSLKRQYMIEDGILDEIRDIDLTTTDELL
QESLSKSSSNRLTEIISTIQEEQNKIIRADLNKPIIVQGAAGSGKTTIALHRISYFIYQY
KENFAPEQLMILAPSRLFIDYISEALPELGVERVRQTTFQEYVLACLGEDLKMADDSKLV
NLLEDHGSEEVNLAAWASSIKGSPVFQTILTNYLKEIYNSFCPSDDFMVDKFRLFSHKKF
FQLFLEDYNYLPLYRRLEKLKAVLQNDLAKKKKNIIKKIETYYDERIERALNRGKDPEKR
RQYVSDALDKKAARLEELKKSFRTAVPKYMKQFPKKSLIRYYKDLFEDSNRLSRLSGGKL
PLKDADLLCEYCRKLFRKKVYEREDLALMLYLQESLFGIPKELKAKNIVIDEAQDYSFME
LLSLKKSLDTDMFTLVGDLAQGIHSYRGLTSWQEVLDFIFPRATYTELQKSYRTTVEIME
KANELLKLLPYSFPEVEPVVRHGKSPEFIKRENGHRLVQQLEEQVISLKKEDYKTFAVIG
KTMKDCLLIHGLFKKHAKLPFKLLQEQESIPKDEIVIVPSYLAKGLEFDGVIILSLEEEF
SIKSELDIKLLYVAMTRPLHRLYFYGMERNNFIIG
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgaatttgaacaccccgattttcagcaggagactcagcggctggaatttacg
aaacgttatattgatgtcgtaattaaaacgtcagaatccagcaaagataagttccaggaa
aatatgaaagaagctttcgaagacgttgattggcttgaatccagtttaagttactcttct
ttattgacaaatgcccgtttctttgaaatgtccaaagatgaattaaaacaattgaaaaaa
gcccgaaaaaagccatatttcgccagaattgatttcttaagagaagatttaaatgaaaaa
gagatcttatacataggcaaaacttcattgtattcaagggagaatcaggagcagattatc
gttgactggcgttctccgatagccaatttatactatgaaggcaggctgggagaggttcaa
tatcattcctatgaagaaagctttacgggccatctgtcattgaaacggcaatatatgatt
gaagatgggattctggatgagatccgggatatagacctcacgactacagatgaattgctt
caggaatcactgtctaaaagctcaagcaaccgcctcacagaaattatttcaaccatacag
gaagaacagaataaaataatacgtgctgatttgaataagcccatcattgttcagggggca
gcaggaagcggaaaaacaacaattgccctgcacaggattagttatttcatttatcagtac
aaagaaaattttgcacctgaacagcttatgattctggcaccaagcaggctattcattgat
tatatttcagaagctcttcctgagcttggggtagaaagagtccgccagactaccttccag
gaatatgtgctggcatgtcttggtgaggatcttaaaatggctgatgacagtaaattggtg
aacttgcttgaagaccatggcagtgaagaagtaaaccttgcagcctgggcatcatccatt
aaaggatcgcccgtttttcagacaatcctcaccaattacctaaaagaaatttataatagc
ttctgccccagtgatgattttatggtagataaattcaggctgttcagccataagaaattc
ttccagctttttttggaggattacaattatctgcctctttatcgaaggctcgaaaaatta
aaggctgtgcttcaaaacgatcttgctaagaaaaagaaaaatatcataaagaaaattgaa
acgtattatgacgagagaattgaaagggcccttaacagagggaaagacccggaaaaaaga
agacagtatgtttcagatgcgcttgataaaaaagctgccaggctggaagaattaaagaaa
agcttcagaactgctgtgccaaaatacatgaagcaatttccgaaaaaaagccttatccgt
tattataaagacctgtttgaagactccaaccgtctttcaagattgtcaggcgggaaattg
cctctaaaagatgcagatctgctatgtgagtactgcaggaaattgttcaggaaaaaggtt
tatgagagagaagacttagctttaatgctttacttgcaggaaagcctttttggcatccct
aaagagctgaaggcaaaaaatatcgtcattgatgaagcacaggattacagtttcatggag
ctcctctctttaaaaaagtcacttgatacggatatgttcacattagtgggggatcttgca
caaggaattcattcctacaggggactaacaagctggcaggaggttcttgactttattttt
cctcgtgcaacatatacagagcttcagaaaagctatcgtaccaccgtggaaatcatggaa
aaggcgaatgaattgctcaagcttctcccctattcattccctgaagtcgagccggttgtc
cgccatgggaaaagtcctgaatttatcaagagagagaatggccacaggcttgtacagcag
cttgaggaacaggtaatttcattgaaaaaagaagattataaaacatttgcggtgatcggg
aaaacgatgaaagactgtctgctcattcatggcctttttaaaaagcatgccaagctccct
tttaaactgctgcaggagcaggaaagcataccaaaggatgaaatcgtcatcgtcccctcc
tatttggcaaagggtctggaatttgacggggtcataattctgtcgcttgaggaagaattt
tctataaagtctgaattggatattaagcttctttatgtcgctatgacaaggcctctgcac
cggttatatttctatggaatggaaagaaacaattttattattggttaa
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