Cytobacillus oceanisediminis: A361_10240
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Entry
A361_10240 CDS
T04330
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon02024
Quorum sensing
bon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A361_10240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A361_10240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bon03019
]
A361_10240
03036 Chromosome and associated proteins [BR:
bon03036
]
A361_10240
Messenger RNA biogenesis [BR:
bon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A361_10240
Chromosome and associated proteins [BR:
bon03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
A361_10240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Ribosomal_L30
Motif
Other DBs
NCBI-ProteinID:
AND39494
UniProt:
A0A160MAF6
LinkDB
All DBs
Position
2025160..2025393
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AA seq
77 aa
AA seq
DB search
MKSAINIQDQVLNQLRKDNINCTVFLLNGFQIRGQIKGFDNFTVLFESEGKQQLVYKHAI
STFVPQRNVQLDMENQQ
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcaatcaatattcaggatcaggttcttaatcagctacgcaaggataatatt
aattgtactgtatttttgttaaatggattccaaattagaggccaaatcaaaggctttgat
aatttcacggtattattcgagtcagaaggcaagcagcagctcgtttataagcatgccatt
tctaccttcgttccacagcgcaatgttcagctggatatggaaaaccagcaataa
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