Cytobacillus oceanisediminis: A361_11395
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Entry
A361_11395 CDS
T04330
Name
(GenBank) transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A361_11395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bon03000
]
A361_11395
Transcription factors [BR:
bon03000
]
Prokaryotic type
Helix-turn-helix
Other families
A361_11395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_10
HTH_31
TPR_2
TPR_12
RapH_N
TPR_1
Motif
Other DBs
NCBI-ProteinID:
AND39718
LinkDB
All DBs
Position
2224001..2225248
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AA seq
415 aa
AA seq
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MIIGKIIKFYREREGLTQGQLGEGICSVTHLSKIERGITEYSGEITHLLARRLGINPEEE
ILRYHQLAKRLDEWHESMIMQRIQESKQIKKELQVEKLIHMPDFQTLYGLLSARFYLSVS
DLESASKLISDLNKASAAFSPHDANLLKHIQGIYYFLTGQYRDCISCLASIDRDQYNYDE
YYYHLAIAYHSIHSNITAYYYGKKALQYFQRTLNILRIIDTEMLLIVQLNAKELHDFNET
KEKYEQLIKLCDACNSGDRKSKLYHNLAFEYFRRKKYRESAGLYEEALKLTAENAPHYLT
ALDGYIHTCYKGKLQAGSALIKLAEEGMERAKAADSFTWIYFQLHLYLLKKEELQYYQFI
EETALPYFKKIGYGILIDHYKKKLFHFYSEIGEAQKAIELARSFIQKQKSYYDHE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgggaaaataattaagttttacagggaacgagaaggcctaactcagggtcag
ctgggagaagggatttgttcagtaacccatttaagtaaaattgaaagggggattaccgaa
tactccggggaaattacacacctcctggccaggaggctcggcattaatcccgaagaagaa
atacttcgatatcatcagcttgcaaagaggctggatgaatggcatgagagcatgatcatg
cagcgaatacaggaatcaaaacagataaaaaaggagctgcaggttgaaaaactgattcat
atgccagattttcagactctatatgggcttctgtcagcaaggttctatttatctgtgagt
gatttggagtcagcctcaaaattaatctcggatcttaataaagcttccgctgccttttcg
cctcatgatgcgaatctgttgaaacatatccagggcatctattactttcttacaggtcaa
taccgtgactgtatcagctgtttagcttccattgacagagatcagtacaactatgatgaa
tactattaccacctagcgattgcttaccattccatccattcaaatattacagcctattat
tacgggaaaaaggctcttcaatattttcaaagaaccttaaatattctccgcattatagac
acagaaatgctgctgattgttcagctaaatgccaaagaactacatgattttaatgaaaca
aaggaaaaatatgaacagttaattaagttatgtgatgcgtgtaattcaggtgaccggaaa
tccaagctttatcataatctggcattcgaatattttcgccgaaagaaatacagggaatca
gcaggcctttatgaagaagcacttaagcttactgccgaaaatgctcctcactatttaact
gctttagatggttacatccatacctgttataaaggaaaacttcaggccggcagtgcgcta
ataaaattagctgaagagggcatggagagggcaaaagcagctgattcatttacctggatt
tattttcagcttcatctctatctattgaaaaaagaagaactgcaatactatcaatttatt
gaggaaacagctttgccgtactttaagaaaattggctatggcattttaatcgaccattat
aagaaaaagcttttccatttttattcagaaataggtgaggcacaaaaagcaattgagctc
gcccgttcttttatacagaaacaaaaaagctattatgatcacgagtaa
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