Cytobacillus oceanisediminis: A361_11730
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Entry
A361_11730 CDS
T04330
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bon
Cytobacillus oceanisediminis
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_11730
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A361_11730
Archaeal homologous recombinant proteins
A361_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
DUF1664
DUF1512
SMC_N
DUF5490
Motif
Other DBs
NCBI-ProteinID:
AND39781
UniProt:
A0A169FMY1
LinkDB
All DBs
Position
2299851..2302985
Genome browser
AA seq
1044 aa
AA seq
DB search
MKPLKLTMQAFGPYADSESIDFTELGNRTMFVISGKTGSGKTTIFDGISYAIYGKASGED
RNGPELRSQFAKNNTLTEISLEFILRNKRYYITRSPQQEKKKERGDGTTTVSAKAELYMY
GENGEQKLLASNVRDVDEKIKEIMIIDSNQFRQILMIPQGEFRKLLTSESKDKEVILQRL
FHTQIYKSIEEKLKEDATELKRTVEEQIKLRDQYFNQVQALYSEELKSCLEAGSVNDTLL
MPLLAEEIKEMEAGLAELTEAGRKKKEQRDHLQQKLYEAEMVLKQLKTKEELKQRKEELE
GLRGQYTAKENAIALAQKAALLNQQEQLCHELKKDLDAAHADLHELQKNIGTLETLLKEK
QDKWESEKNREEERKQAAEQVNHLQNMKEDILSYAKVEKLVRSLEKNLEYLRLQKRQKDE
AHQKADLQIKTLSEEKQDIEKSKLAQIENERNLEKLTDEIERLHKYEELHKEHQLSMNAF
SNKRNYFDQTSSRLTDAKLLVEELEGKWLHGQASFLANRLQNGEACPVCGSEHHPNPAVS
PHDIPDEKDLKEAKKQAAQIEAEKAKAESAFYEAQSRMNSSESGLAELTAQIQKHRPDFK
QESLLVLKNTLADQKKDLLKIHAELKKKSLRLENCTAELEKTQQRKEALTAEIDRLQDQI
NDAAILHAEKRSNLARMTDTIPENLRSIDAYESSLKTAAEKLEIMQRQLESSQQNYQDAK
SALLAEQAKLETLQKQADKIEQKLAAERQNFVQRMKDQGFEVYGEYRDAKKSEDQIRQLE
GEVREYREEVRSVHDRYAELGQLLEGIEKPDLDSLQLLLQETDDQLKLLQDQYTNLFMMK
KQNKETMQKIEEINENMKALEERYKVIGHLYEISKGQNTYRITFERFVLAAFLDDILREA
NGRLSKMTSGRYMLLRKTDRSKGNAQSGLELLVFDQYTGQERHVKTLSGGESFKAALALA
LGLADVVQQYAGGVSLETMFIDEGFGTLDPESLDQAIEALIEIQSSGRLVGIISHVPELK
ERIDARLEVTASQTGSRTQFQFLN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattaaaattaacgatgcaggcgttcggcccctacgcagacagtgagagcatt
gattttacggaacttggaaatcggaccatgtttgtcatctccggaaagacgggttcaggt
aaaaccactatttttgacggcatcagctatgcgatttacggaaaggcgagcggggaggat
cgaaatggccccgaacttcgaagccagtttgcgaaaaataatacactaaccgagatttcc
ctcgaattcattttaagaaataaaagatattatattactaggtctcctcagcaggaaaag
aaaaaagagcgcggcgatggcacgacgacagtaagtgccaaagcagaactgtatatgtat
ggtgaaaatggagagcaaaagctcctggcttcaaatgtcagggatgttgatgaaaagata
aaagaaattatgatcattgacagcaatcagttcaggcaaattctgatgattccccaggga
gagttccgaaagctcctaacttctgaaagcaaggataaggaagtcattcttcagcggtta
ttccatactcaaatatacaaaagcatagaagaaaaactaaaagaagatgcaactgaatta
aaaagaacggtagaagaacagataaaactgagagatcagtattttaatcaggttcaggct
ttatatagcgaggagctgaaatcctgcctcgaagcaggaagtgttaatgacaccctgctc
atgccgcttcttgcagaggaaattaaggaaatggaagcaggccttgctgagctgacagaa
gcaggcaggaaaaagaaggaacagagagatcatcttcagcaaaagctctatgaagctgaa
atggtactcaaacagctgaagacgaaagaagagctaaagcaaaggaaagaagagctggag
gggcttaggggccaatatactgccaaagagaatgccattgctcttgcccagaaagcagcc
ctgcttaatcagcaggagcagctctgtcatgaactgaagaaagatcttgatgcagcacat
gccgatcttcatgagcttcagaaaaatataggcactcttgaaactctcctaaaagaaaag
caagataaatgggaatctgaaaagaaccgcgaggaagaaagaaaacaagctgccgaacag
gttaatcacctgcaaaatatgaaagaggacattctctcgtatgcaaaagtggaaaagctg
gtccgttctcttgaaaaaaatcttgaatacctccggcttcaaaagagacagaaagatgaa
gcccatcaaaaagctgatttacaaataaaaacactttctgaagaaaagcaggacattgaa
aagagtaagcttgcacagattgagaatgaacgaaacctggagaaactgacagacgaaata
gaacggcttcataaatatgaagagctgcataaagagcatcaattatcaatgaatgccttc
agcaataagagaaattattttgatcagacttcatccaggctgactgatgccaaactgctt
gtggaagaactggagggcaagtggcttcatggacaggcatcgttcttggcaaacaggctg
caaaacggggaggcatgtccggtctgtggctcagaacaccatccaaatccggctgtatct
ccgcatgatattccggatgaaaaagacctaaaggaagcaaaaaaacaggcagctcaaatt
gaagccgagaaagcgaaagcggagtctgctttttatgaagcccagtcccgcatgaattcc
agcgagagtggattggctgaactcacagcccaaatacaaaaacaccgtcctgactttaaa
caagaaagtttgcttgtgctgaaaaatactcttgccgatcaaaagaaggatcttctgaaa
attcatgctgaactgaagaagaaatctttaaggctggaaaactgtactgctgagttagaa
aaaacacagcagaggaaagaagctctaactgcagaaattgaccggctgcaagaccaaata
aatgacgcagccattttgcatgcggaaaagagaagcaacttggcgaggatgacggatact
attcctgaaaacctgcggtctattgatgcttatgagtcaagtttgaaaactgctgctgag
aaacttgaaattatgcaaaggcagctggaatcatcccagcagaattatcaagatgcaaag
tcggccctcttggcagaacaggcaaaactggagacacttcaaaagcaggctgataaaatc
gagcaaaagcttgcagccgaaaggcagaattttgtgcagcgcatgaaggaccagggcttt
gaagtctacggagaataccgtgatgccaaaaaatcagaggatcagatcaggcagcttgaa
ggtgaagtaagggaatatcgggaagaagtccgttctgttcatgatcgatacgctgagctg
gggcagctcttggaagggattgaaaaacctgacctggatagcttgcagctattattgcag
gaaacagatgatcaattgaaactgctgcaggatcaatatacaaatctgtttatgatgaaa
aagcaaaataaagagactatgcaaaaaatcgaagaaataaatgaaaatatgaaagccctg
gaggaaaggtacaaagtaatcgggcacttgtatgaaatttcaaaagggcagaacacttac
cgaattacttttgaacgatttgtcctggcggcctttttagatgatatactgagggaagcc
aacggacgtttatcaaagatgactagcggaagatatatgctgcttcgaaaaacagaccgg
tcaaagggcaacgcacaaagcggcctggaattgctagtgttcgatcaatacactggacag
gaaaggcatgttaaaactttatctggcggagaaagctttaaagccgcgctcgcacttgct
cttggtctggcggacgtggtgcagcaatacgcaggaggggtatcccttgagacgatgttc
attgatgaaggatttggaacacttgatcccgaatcattagatcaggcaatagaagcattg
atcgaaatccaaagcagcggaaggcttgtaggcatcatctctcatgttcctgagctgaag
gaaagaattgatgcacgtctggaagtaacagcaagccagacaggaagccgtacacagttt
caatttttaaattag
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