Cytobacillus oceanisediminis: A361_12690
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Entry
A361_12690 CDS
T04330
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A361_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_12690
Enzymes [BR:
bon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A361_12690
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A361_12690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
SAM_5
DUF2865
Motif
Other DBs
NCBI-ProteinID:
AND39964
UniProt:
A0A160MBG2
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All DBs
Position
complement(2493006..2493863)
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AA seq
285 aa
AA seq
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MDGIRMLFGCHVSIREGYLGAAKAAKAMNASAFQYFPKNPRSLSVKDFNREDAALCRAFC
KEHEIFSIAHTPYPTSLTPQPEKQELTIKSLLNDLEIASACGSAGVVVHFGNPINKKDPL
AGYHLMIEMLNQILSHWEDPCLILLENTAGHPGSMGTTMEELVQVRSLCEHRDQIGFCLD
TCHAFASNLWNGENLNDFLKKGEELGYFNHLKAIHLNNSKYPAGSGKDRHANIFNKGHIT
AKQFDQVVNTEPFQRLPLILETPSGEGIEHHEEVELLIKRWGKQP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatcaggatgttatttggctgtcacgtaagcataagggaaggatatttagga
gctgcaaaagctgcaaaggccatgaatgcttctgcctttcagtactttccgaagaatcca
agaagcttgagtgtaaaggattttaatcgggaggatgcagctctttgcagggcgttttgc
aaagagcatgaaatcttttcgattgcacatactccatatccaaccagcctcacaccgcag
ccggagaagcaagagctgacgattaagtctttgctgaatgatctggaaattgccagtgcc
tgtggctcggcaggagtggttgtacatttcggaaacccaatcaacaaaaaggatccgctt
gcaggatatcatttaatgatcgagatgcttaatcaaatcctctctcactgggaagaccct
tgcttgatcctgcttgaaaacactgctggccaccccgggtcaatgggtacaacgatggag
gagcttgttcaggttcggagcctgtgtgaacaccgggatcagattggtttttgtctggat
acttgccatgcctttgccagcaatctctggaatggagaaaatctaaatgattttcttaaa
aaaggggaagagttgggctatttcaatcatcttaaagccattcacttaaataactccaaa
tatcctgcaggctcaggtaaagacagacatgccaatatatttaacaaaggtcatattact
gcgaaacaatttgatcaggttgtcaataccgaaccatttcaaagattgccattaattctg
gaaacaccttctggtgaaggaattgaacatcatgaagaagttgaacttctaattaaaaga
tggggaaaacagccatga
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