Cytobacillus oceanisediminis: A361_15415
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Entry
A361_15415 CDS
T04330
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A361_15415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bon03000
]
A361_15415
Transcription factors [BR:
bon03000
]
Prokaryotic type
Helix-turn-helix
Other families
A361_15415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_2
TPR_10
TPR_12
HTH_31
MitMem_reg
TPR_1
HTH_19
RapH_N
Motif
Other DBs
NCBI-ProteinID:
AND40479
LinkDB
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Position
3050060..3051307
Genome browser
AA seq
415 aa
AA seq
DB search
MIEGEIIKFYRKKAGLTQEQLGFGICTLSYISKIERGHTACSAEIIELLSERLHLDIKKE
ILRFENLGNQLNQWHKAIVMRRLKEVDEINIELKKIPYIKSSKYAALYQLLQARYYIIKM
NYKKTYSILQSVQKEHPSLPPYERNLLKHAWGIYYICNCISSRTENHQKAIEVLKEIEKD
EYGNPEYNYDLAVAYHCIDSRVMAYVHAEKALRYFRETNNSIMAITAESLMLLQIGNDIH
LNLEELTESYHNLIHHSELLQATDKKGMLLNNLGFEHFRRKDYAHAHKFYKEALSMTNKH
STSYLQRLYNYLESGLAGKIMRKTSILRKAQEGLSMAKNLENEFYHLLFKLFILLTENKL
NKYYTFLEKDALPYFITNKHTVFINKYAKELYDHYMESEDFQKAAQISKVLIDPN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatagagggagaaatcattaaattttacagaaaaaaggcaggtcttacccaggaacaa
cttggttttggaatttgcactctttcctatatcagcaagattgagcgagggcatacagct
tgttctgcagagattatcgaattactatcagaacgcttgcacctcgacataaagaaagaa
atccttcgatttgaaaacctggggaatcagctcaatcagtggcataaggccattgttatg
cggagattaaaagaagtagatgaaatcaatatagaattgaagaaaatcccttatattaaa
tcttcgaaatatgccgcattataccagctgttacaggcaaggtattatatcataaagatg
aattataaaaagacatattctattttacagtctgtacaaaaagaacaccccagcctcccc
ccttatgagagaaacctgctgaagcatgcatggggaatatactacatatgcaattgtatt
tcatccagaaccgaaaatcatcaaaaggctatagaagtcttgaaagaaatagaaaaggat
gaatatggaaatcctgaatacaattatgatttagccgttgcttatcactgtatcgattcc
agagtgatggcttatgtgcatgctgaaaaagcactccgctattttagagaaaccaataat
tccattatggcgatcacggcagagtcgctgatgcttctccagattggaaacgacatacac
ctcaatctagaagagctaacggaatcctatcataatttgattcatcacagtgaattactg
caagccactgataaaaaaggaatgctattaaacaatcttgggtttgaacattttagaaga
aaagattatgctcatgcacataagttttataaagaagcactttctatgactaataagcat
tccacttcatatcttcaacgcctgtacaattatttggaaagcggtcttgcgggaaagata
atgcgtaaaacctcaatattaagaaaagcacaagaaggactttccatggcaaaaaacttg
gaaaacgaattttaccatctattattcaaactttttattttacttacagagaataaatta
aataagtattacaccttcttagagaaagatgccctaccctattttattacaaataagcat
acggtttttataaacaagtatgccaaagaactatatgatcactatatggaaagcgaagat
tttcagaaagcggcccaaatttcaaaggtacttatagatccaaattag
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