KEGG   Cytobacillus oceanisediminis: A361_22145
Entry
A361_22145        CDS       T04330                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bon  Cytobacillus oceanisediminis
Pathway
bon03030  DNA replication
bon03410  Base excision repair
bon03420  Nucleotide excision repair
bon03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A361_22145
   03410 Base excision repair
    A361_22145
   03420 Nucleotide excision repair
    A361_22145
   03440 Homologous recombination
    A361_22145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bon03032]
    A361_22145
   03400 DNA repair and recombination proteins [BR:bon03400]
    A361_22145
Enzymes [BR:bon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A361_22145
DNA replication proteins [BR:bon03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A361_22145
DNA repair and recombination proteins [BR:bon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A361_22145
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A361_22145
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 UBA_3 HSBP1
Other DBs
NCBI-ProteinID: AND41747
UniProt: A0A160MF06
LinkDB
Position
complement(4403441..4406074)
AA seq 877 aa
MDKKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLQRILEDEKPTHLLVAFD
AGKTTFRHKTFSEYKGGRQKTPPELSEQFPYIRELLDAYGISRYELENYEADDIIGTLSL
HAEKDGYEVKVISGDKDLTQLSSDAVTVSITRKGITDIEEYTPAHIEEKYGITADRIIDM
KGLMGDSSDNIPGVPGVGEKTALKLLKEFGTLEELLDSVDKVSGKKLKEKLEEFRDQALM
SKELATITREAPVEIKIEDVEYEGFEKEKVINIFKELGFNSLLEKLGGDTEAVEENLEEI
EFIIADEIKEEMFTDENAFYVELLEDNYHYADIIGFSVANDKGNFFFSKETALKSDVFKT
WAEDETKKKTVYDAKRSEVSLRHHGVHLKGADFDLYIASYLINPSQTIEDMASIAKNHGY
NAIQSDEAFYGKGAKRRIPEEKELAGHLARKAAALMTLKEKLDSELKENQQSELFYDLEM
PLSLILADMESTGIKVDLERLKTMGQDLLSKLDEIEKRIHELAGEAFNINSPKQLGVILF
EKLGLPAIKKTKTGYSTSADVLEKLENSHEIIRDILHYRQLGKLQSTYIEGLLKVVNYET
GKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPGWAIFAADYSQIEL
RVLAHIANDEKLIEAFNEDMDIHTKTAMEVFHVNADEVTSNMRRHAKAVNFGIVYGISDY
GLSQSLGITRKEAGKFIDRYLESYPGVKQYMDDIIHDAKQKGYVSTLLHRRRYLPEITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMIDMADRLRKEELKARLLLQVHDELIFEVPED
EIETLKKIVPDVMENAVELKVPLKVDYSFGPTWFDAK
NT seq 2634 nt   +upstreamnt  +downstreamnt
ttggataaaaaaaagcttgttctgattgatggcaacagcatagcttatcgggcatttttt
gctctgccgcttttaaacaatgataaaggaatacatacaaatgctgtctacggatttacc
atgatgctgcaaaggattctcgaggatgaaaaaccaactcatcttcttgtggcgttcgat
gccggaaaaacaaccttccgccataaaaccttcagcgagtataaaggcggaaggcagaaa
acaccgcctgagctatcagagcagttcccctatatcagagaacttcttgatgcttacggg
atttccagatatgaactggaaaactatgaagcggatgatattattggaacactgtccctg
catgccgaaaaagatggctatgaagttaaagttatatctggggataaggatttaacacag
ttaagttctgatgctgtaacagtcagcattacccgcaaaggcattactgacattgaagaa
tacacaccagctcatatagaagagaaatacggaatcacagctgacaggattattgatatg
aaaggcctaatgggagatagttccgataatatcccaggagttccgggagttggggaaaaa
acagcccttaaattgctgaaagagtttggaaccctagaagagctcttggattctgttgat
aaggtgagcgggaaaaaactgaaagaaaagctggaagaattcagggatcaagctttaatg
agcaaagaacttgccactatcaccagagaagcccctgttgaaattaaaattgaagatgtt
gaatatgaaggttttgaaaaagaaaaagttataaacatctttaaagaattaggctttaac
tctttactggaaaagctgggcggtgacacagaagcggtcgaagagaatcttgaagaaatt
gaatttatcattgcggatgaaattaaggaagagatgtttaccgatgaaaatgcattttat
gttgagcttctagaagataattaccattatgcagacatcattggtttttccgttgcgaat
gataaggggaattttttcttctccaaagaaacggctttaaagtcagatgtttttaaaacg
tgggctgaagatgaaacgaaaaagaagacagtctatgatgccaaaagatcggaagtctca
ctccggcatcatggagttcatctaaaaggtgccgattttgacctttatattgcttcttat
cttattaacccatctcagactattgaagatatggcctctatagcaaaaaatcatggctat
aatgcgattcaatctgatgaagctttttacggaaaaggagcaaaaaggcggattccggaa
gaaaaggaactcgccgggcatttggcaaggaaagcagcggccttgatgacattgaaggaa
aaattggatagtgaattgaaggaaaaccagcaatccgagctattttatgacctggaaatg
ccgctgtctctgattttggctgatatggaatcaaccggtattaaagtggatcttgagcgc
ctgaaaacaatgggacaagacctgctctccaaattggatgaaatcgaaaagcgcatacat
gagcttgccggagaagcgtttaatatcaattctccaaaacagctcggtgtgatccttttt
gaaaaattagggctgcctgccattaaaaaaacaaaaacagggtattccacatctgctgat
gttctggagaaactagagaacagccatgaaattatccgggacattctgcattaccgccag
cttggcaaacttcaatccacttatattgaaggcctgcttaaggtggttaactatgaaaca
ggcaaagtccacaccagatttaatcaggctcttacacagacaggaaggttaagctcaaca
gatccgaacctgcagaatattccgatccgtctggaggaagggagaaaaatcaggcaggca
tttgtcccttcagaacctggctgggccatctttgcagcagactactcgcagattgaactg
agagtactggctcatattgcgaatgatgaaaagctgattgaagcatttaatgaagatatg
gatattcacacgaaaacggcaatggaagtattccacgttaatgccgatgaagttacatcc
aatatgcggcgccatgcaaaggccgtaaactttggaattgtctacggaatcagtgattat
ggcctgtcccaaagcctgggtatcacacggaaagaagcgggtaaatttattgaccgctat
ctggaaagttatcctggcgttaagcagtatatggatgatattatccatgatgctaaacaa
aagggatatgtctcgacccttcttcacagaagaaggtatctgcctgaaatcacaagccga
aacttcaacctgcgaagctttgcagaacgaaccgccatgaatacaccaatccagggaagc
gcggccgatataataaaaaaagccatgattgacatggctgaccgcctaagaaaagaagaa
ctcaaagcacgccttctgctgcaggttcacgatgaactgatctttgaggtgccagaggat
gaaatagaaacgctcaaaaaaatcgtaccggacgttatggaaaatgcagtagaattgaaa
gttccgctaaaagtggattattcctttgggccaacgtggtttgatgcgaaataa

DBGET integrated database retrieval system