Cytobacillus oceanisediminis: A361_22240
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Entry
A361_22240 CDS
T04330
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03030
DNA replication
bon03430
Mismatch repair
bon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A361_22240 (dnaE)
03430 Mismatch repair
A361_22240 (dnaE)
03440 Homologous recombination
A361_22240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bon03032
]
A361_22240 (dnaE)
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_22240 (dnaE)
Enzymes [BR:
bon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A361_22240 (dnaE)
DNA replication proteins [BR:
bon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A361_22240 (dnaE)
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A361_22240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
HROB
DNA_pol_IIIA_C
Mitofissin
Motif
Other DBs
NCBI-ProteinID:
AND41765
UniProt:
A0A169FXJ7
LinkDB
All DBs
Position
complement(4426269..4429628)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSFIHLHVYSAYSLLSSTARIEQLVSGARENRFPALALTDRNVMYGAVAFYKECLKQSIK
PILGLSVDVLSEISEGEAYPMVLLAKDRQGFQNLLKITSTVQTKSPEGIPVKWLKHYAGG
LFALTPGLDGEIEHYLEAGEYGQAKRIAELFSSLFEPHSFFFTIQDHGLREEKKNHELLV
QLSGETGIGLAASNGVCYIKKEDAFAHECLLAIKNGEKLQDEARERLKSDEYYLKSSGEM
AELLSGYPDALENTIKIAEQCNVMLELDKQNLPKYPAVKGMSADELLAEVCWKGFADRYP
DADGEHRERLQYELNIIKNMKFSDYFLIVWDFMKFSRENGILTGPGRGSAAGSMVAYVLY
ITDVDPIEHQLLFERFLNPERISMPDIDIDFPDHRRDEVIRYVSRKYGELHVAQILTFGT
LAAKAALRDVGRAFGLNPKELDMLSRKVPSKLGISLKEAYKESEPLRRFTEESDLNRRLF
ETAIKLEGLPRHTSTHAAGVVISEHPLVEAIPIQKGHENVYLTQYSMEHLEDVGLLKMDF
LGLRNLTLIENILSSIQRKTGTQIDIKNIPLDDEAVYSLLGRGDTTGIFQLESEGMRSVL
TRLQPTRFEDIVAVNALYRPGPMENIPLFIDRKHGRKPIIFPHPDLKPILENTYGVIVYQ
EQIMQIAAKMAGFSLGEADLLRRAVSKKQKEVLDRERVHFVGGAVKKGYNEQAAHDIYDL
IVRFANYGFNRSHAVAYSFIAYQLAYLKTHYPLHFMASLLTSAVGNEGRIAQYIGELRQM
GLALSPPSINKSGYSFLVEKDSIRYSLAALKGVGAAALRDIFQARKNKRFEDLFDFCIRV
STKAVNRKVLESLVHSGSFDEFGEDRAVLLASLDVAAEHAQLVMPEDDQADFFEDDEFFP
KPKYTEVDPIRSEDKLRFEKDVLGLYLSDHPVSIYESSFHLLDASPLIELERNANKAKTV
AYLSEVKKIRTKKGEPMAFLSLSDQTGDMEAVVFPKVFNRFSMLCSQGSIVFAEGRIEER
DGKKQLIVQHLDDVKEAIEKMQNKDPVLYLRITEDRETSENLRLLKELFKKNEGRVQVVL
YYESSRKTIRLGEEDLISPSEDFLQLLMKVLGQNNVILK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatttattcaccttcatgtatatagcgcttatagcctgctatcgagcacggcaaga
atagaacagctagtgtcaggcgccagggaaaacaggtttcctgccctggctttaacggac
cggaatgtcatgtacggagctgttgccttttataaagaatgtcttaagcagtccataaag
ccaatcctgggcctctctgtggatgtattaagcgagatttccgaaggggaagcttatccg
atggtccttttggctaaagacaggcagggttttcagaatctattaaaaatcacaagcaca
gtccagacaaaatcgcctgaaggcatccctgttaaatggcttaagcactatgcaggagga
ttgtttgctttaactcccggccttgacggggaaatagaacactatcttgaggcgggtgaa
tacggccaggcaaaaagaatagctgaacttttcagcagtcttttcgagccgcattcattc
tttttcactatacaggatcatgggctgcgtgaagagaaaaaaaaccatgaacttctggtt
cagctttccggggaaaccgggattggcctggcggcttcaaatggtgtttgttacataaaa
aaagaagatgcttttgcccatgagtgcctgctggccattaaaaatggagaaaagcttcag
gatgaagcgagagagcggctgaagagcgatgagtattatttaaagtcatccggggaaatg
gcagaattgttatcgggttatccggatgctttggagaatacgattaagatagcagagcaa
tgcaatgttatgcttgagctggataaacagaacctccctaaataccctgctgtaaaaggg
atgagtgccgatgagctattggcagaagtttgctggaagggttttgctgacagatatccg
gatgcagatggtgagcatagggagcgtttgcagtatgagctgaatataattaagaatatg
aaattcagcgattattttctaatcgtttgggattttatgaagttttcgagagaaaatgga
attttaaccggtccggggcggggatctgctgccggttcaatggttgcttatgtcttatat
attacagatgtggatccaattgagcatcagctattatttgagcggttccttaatccagaa
agaatttccatgcctgatattgatatcgatttcccggatcacagaagggatgaggtgatt
cggtatgtgtccaggaaatatggagagttgcatgttgctcaaattcttacgtttggaaca
ttggcagctaaggcggcactacgggatgtcggcagggcatttgggcttaatccgaaagag
ctggacatgctttcaagaaaagtaccttccaaattgggcatcagtctcaaagaggcttac
aaagaatcagagcctttaagaagattcaccgaggaatccgatttaaatcgcagacttttt
gaaacggctatcaaactggaaggtctcccaaggcacacatcaactcatgctgccggcgtt
gtaatcagcgagcacccgctggttgaggccattcccattcaaaagggacatgagaatgtt
tatttgacccaatactcgatggagcatcttgaggatgtcggcctattaaaaatggatttt
ctcggtcttaggaacctgacactaatcgagaatatcttaagctctatacagagaaagaca
ggcacacagattgatataaaaaacattcccctggatgatgaggcagtatacagtcttttg
ggaagaggagatactacaggcattttccagcttgagtctgaggggatgcgaagtgtgctg
acaaggctccagccaacgcgctttgaagatattgtggctgtcaatgccctttaccgcccc
ggccctatggaaaatatcccgctgtttattgacagaaagcacggaaggaagccgattata
tttccgcatcctgatttgaagcctattcttgaaaatacgtatggtgtcatcgtgtatcag
gaacaaattatgcaaatcgctgcaaaaatggcaggattttcactgggtgaagccgatttg
cttcggagagcggtcagcaagaagcaaaaagaagtgcttgaccgtgagcgtgtccatttt
gtaggaggagcagtaaagaaaggctataatgaacaagctgctcatgatatatatgatcta
attgtccggtttgcaaactatggatttaaccggagccatgcggttgcatacagtttcata
gcttatcagctggcatatttaaaaactcattacccgcttcacttcatggcttcactgctg
acttcagcagtaggcaatgaaggcaggattgcccagtatatcggagaactgagacagatg
ggtttggcgctcagcccgccatccataaataaaagcggctattcatttctggtagagaaa
gattcaatcaggtatagtcttgcagccttaaaaggcgtaggtgctgccgctttaagggat
atttttcaggctaggaaaaataagcgctttgaagatctgtttgatttttgcataagggtt
tcaacaaaagctgttaatcgcaaggtcctcgagtccctggttcattcaggaagctttgat
gaatttggggaagatagagctgttctgcttgccagcctggatgtggctgcggaacatgcc
cagcttgttatgccggaagacgatcaagctgatttctttgaggatgatgaattttttcct
aagcctaaatataccgaagtagatccgatccgttccgaggacaagctgagatttgaaaaa
gatgtgctgggcctgtatttatcagatcatccggtttcaatctacgaatcatcttttcac
ctgctggatgccagtccgctgattgaactcgaaagaaatgcaaataaggcaaaaacagtt
gcatatttatccgaagtgaaaaagatccgtacgaaaaaaggagagccaatggcatttcta
tccttgagcgatcagacaggggatatggaggcagttgtttttccaaaggtgtttaaccga
ttttcaatgctgtgctcccagggaagcatcgtctttgcggaaggaaggattgaggaacgg
gacggaaagaagcagctgattgtccagcatctggatgatgtgaaggaagcaattgaaaaa
atgcaaaacaaagatccagttttatatttaaggattaccgaggatcgggaaacatccgaa
aatcttcgtttgcttaaagagttatttaagaaaaatgaaggccgggttcaggtggtttta
tattatgaaagctcccgaaaaaccattcgcctgggtgaagaagacctgatctcgccatca
gaagatttccttcaattgcttatgaaagtgcttgggcagaataacgtcattttaaagtaa
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