KEGG   Cytobacillus oceanisediminis: A361_24485
Entry
A361_24485        CDS       T04330                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bon  Cytobacillus oceanisediminis
Pathway
bon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A361_24485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bon03400]
    A361_24485
DNA repair and recombination proteins [BR:bon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A361_24485
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A361_24485
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD P-loop_SecA HEM4 AAA_30 AAA AAA_19 AAA_7 AAA_22 TrwB_AAD_bind DUF87 UB2H UFL1 PMT2_N HH_RND_rel AAA_16
Other DBs
NCBI-ProteinID: AND42170
UniProt: A0A160MG20
LinkDB
Position
complement(4875433..4877412)
AA seq 659 aa
MKDQFELVSKYSPQGDQPGAIKKIVEGINSGKKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVIAHNKTLAGQLYSEFKDFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSSLFERKDVIIIASVSCIYGLGSPEEYSEMVLSLRTGMEIERNQLLHRLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEIMGEREH
VAIFPASHFVTREEKMRIAVQNIEKELEERLAELRENDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPEDFLIVIDESHVTLPQIRGMFNGDQARKSV
LVDHGFRLPSAMDNRPLTFTEFEKHVKQAVFVSATPGPYELEHTPEMIEQIIRPTGLLDP
TIDVRPIEGQIDDLIGEIQDRIQKNERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADRITDSMEKAISETKRRRSIQEEYNKKHGITPMTIQKDIRDSIRATH
AAEEQEEYQPSAKLGKLNKKEREKLIGDMEKEMKEAAKSLNFERAAELRDLILELKAEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
gtgaaggatcaatttgaattagtctcaaaatattcccctcagggcgatcagcctggggca
atcaaaaaaattgtggagggaattaattccggcaagaagcaccagacgcttttgggtgca
acaggaacgggaaaaaccttcacagtttcaaatgttatacaagaggttaacaagccgacg
ctagtcattgcgcataataagacacttgcagggcagttatacagtgaatttaaggacttt
tttccaaacaatgctgttgagtattttgtcagctattatgactactatcagccggaggca
tatgtgccttctacagatacctttattgaaaaagatgcaagcatcaatgatgaaattgat
aagctccgccactcggcgacttcttcattatttgagcgcaaagatgtcattataattgcc
agtgtgtcttgtatatatggtttgggttctcctgaagaatacagtgaaatggtgctatcc
ctcagaaccggcatggagattgagaggaaccagcttcttcacaggctcgttgacattcag
tatgaacgcaatgatatcgacttccagcgcggcaccttccgtgtacgcggggatgtagta
gagattttcccggcatcacgggatgagcattgtatccgtgtagagtttttcggggatgag
atagaccggatccgtgaagtagatgccctcaccggagaaattatgggtgaacgtgagcac
gttgcgatcttcccggcatcccacttcgtaacgcgtgaagaaaaaatgcggatcgccgtc
cagaacattgaaaaagaactggaagagcgccttgctgaattaagagaaaacgataagctg
cttgaagcccagcgcctcgagcagcggacccgctatgaccttgagatgatgagggagatg
ggtttttgttccggcatagaaaactactcccgccaccttacattaaggccgcctggttca
acaccgtatacccttctggattattttccggaagactttctaattgtgattgatgagtcg
cacgtaactctgccgcaaatccgcggtatgttcaatggtgaccaggcaagaaaatccgtg
cttgtggaccatggtttccgtttgccttcagccatggataacaggccgcttacgtttacc
gagttcgaaaagcatgtgaaacaggctgtctttgtttctgcaacacctggcccttatgag
cttgagcatacaccggaaatgattgagcaaattatccgcccaaccggtttgcttgatccc
actattgatgtccgtccaatcgaagggcaaattgatgacctaatcggtgaaatccaggat
cgcattcagaaaaatgaacgtgtgcttgtcactacattaacaaagaaaatgtctgaggac
ttgacagactacttaaaagaaatcggcattaaagtgcagtatctgcactcagaggtaaaa
acgcttgagcggattgagattatcagagagcttcgtctaggtaaatacgatgtgttagtc
ggaatcaaccttctaagggaaggacttgatataccggaagtgtctctcgttactatactt
gatgctgataaggaaggtttcctccgttcggaacgttcactcatccagacgattggacgt
gcagcgcgtaatgcgaatggccatgtcataatgtacgcagaccggatcactgacagcatg
gaaaaagccatcagtgaaacaaagcgccgccggtccattcaggaagagtacaataagaag
catggcatcacgccaatgactatacagaaggatatacgcgattcaatccgtgcaacacat
gcggcagaagagcaggaagaataccagccgtcagcaaagctcggcaagctgaacaagaaa
gagcgcgagaagctgatcggcgatatggaaaaagaaatgaaggaagcggccaaatccctg
aatttcgaaagggctgccgagcttcgtgatctaatattagagctgaaagcggaaggatga

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