Cytobacillus oceanisediminis: A361_25925
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Entry
A361_25925 CDS
T04330
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon00260
Glycine, serine and threonine metabolism
bon00460
Cyanoamino acid metabolism
bon00630
Glyoxylate and dicarboxylate metabolism
bon00670
One carbon pool by folate
bon00680
Methane metabolism
bon01100
Metabolic pathways
bon01110
Biosynthesis of secondary metabolites
bon01120
Microbial metabolism in diverse environments
bon01200
Carbon metabolism
bon01230
Biosynthesis of amino acids
bon01240
Biosynthesis of cofactors
bon04981
Folate transport and metabolism
Module
bon_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A361_25925
09102 Energy metabolism
00680 Methane metabolism
A361_25925
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A361_25925
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A361_25925
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A361_25925
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A361_25925
Enzymes [BR:
bon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A361_25925
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
OKR_DC_1
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AND42448
UniProt:
A0A160MI41
LinkDB
All DBs
Position
complement(5196562..5197803)
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AA seq
413 aa
AA seq
DB search
MKHLAQQDEQVFKSIQEELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVVEDLARDRAKEIFGAEHVNVQPHSGAQANMAVYFTVLEQGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVEYGVDKETHRINYDDVLEKARQHKPKLIVAGASAYPREIDF
KRFREIADEVGAMLMVDMAHIAGLVAAGLHQNPVPFADFVTTTTHKTLRGPRGGMILCKE
EYAKKIDKSIFPGIQGGPLMHVIAAKAVAFGEALQEDFKTYAGNIISNAKKLAEALQAEG
IDLVSQGTDNHLLLVDLRSLGLTGKVAEKVLDEVGITVNKNTIPFDPESPFVTSGIRIGT
AAVTSRGFGEKEMQEIASIIAFTLKNHEDEGKLQEAAQRVEALTGSFTLYPEY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatttagcacagcaggatgagcaggttttcaagtcgattcaggaagaattggga
cgccagagatcaaagattgaattaatcgcttctgaaaactttgtcagtgaagcggtaatg
gaagcacagggttctgttttaacaaacaagtatgctgaaggctacccaggccgacgctat
tatggcggttgtgaacatgtggatgtagtcgaagatttagcacgtgaccgtgcgaaggaa
attttcggagcagagcatgtgaacgtgcagccgcactcaggtgcacaggcaaatatggct
gtatacttcactgtccttgaacagggagacactgttcttggcatgaatctatcccatggc
ggtcatttaactcatggcagtccagttaatttcagcggcgtgcagtacaatttcgtcgaa
tatggggtggataaagaaacacatcgcatcaattatgatgatgtgcttgaaaaggcccgt
cagcataaaccgaaactaattgtagcgggtgcaagtgcctatccgcgtgaaattgacttc
aagcgtttccgtgaaattgccgatgaagtcggtgccatgctgatggttgatatggctcat
attgcaggtcttgtagctgctgggcttcatcagaatccggttccgttcgcggactttgtt
acaactaccacgcacaagacattacgcggaccgcgcggcggcatgattctctgcaaagaa
gaatatgcgaagaaaattgataaatccattttccctggaatccagggcggtcctttaatg
catgttattgcggcaaaagcggttgccttcggcgaagcgcttcaggaagacttcaaaaca
tatgcaggcaatattatttctaatgccaaaaagctggcggaagcattgcaggctgaagga
attgaccttgtatcacagggtacagacaaccacctgctcttagttgatctccgctccctt
ggtttaacagggaaagtagctgagaaagtacttgatgaggtcggcattacagtcaacaaa
aacacgattcctttcgatccggaaagcccattcgtaacaagcggcatccgcatcggaaca
gcggctgtgacttcccgcggatttggcgaaaaagaaatgcaggaaattgcatccattatt
gccttcacactaaagaatcatgaagatgaagggaagcttcaagaagcggctcagcgcgtc
gaagccttaacaggcagcttcactttatatcctgaatattaa
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