Rhodophyticola sp. CCM32: E2K80_00645
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Entry
E2K80_00645 CDS
T05925
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03030
DNA replication
boo03430
Mismatch repair
boo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2K80_00645
03430 Mismatch repair
E2K80_00645
03440 Homologous recombination
E2K80_00645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boo03032
]
E2K80_00645
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_00645
Enzymes [BR:
boo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2K80_00645
DNA replication proteins [BR:
boo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2K80_00645
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2K80_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
DEDDh_C
RNase_H_2
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QBX99418
UniProt:
A0A4P7J8G3
LinkDB
All DBs
Position
complement(131546..133543)
Genome browser
AA seq
665 aa
AA seq
DB search
MFTHLSLRLRIFIFFAALACGAALLVLGGLTLGYTRLGEDHALSSFVIAGVVAVFAVVAL
ITWVWVLFDEYIARPVERLAADMRARAHAGVGHDIDHAPARYLGDLAPAAAAVAANLTEA
RNAMALSIGRETARLGLEKTRLETLLAEVPDGVLFCTPDHVVVLYNGQAREILEDHPALG
LNRPLSGVLLPGPIRQAYDRLLAAEAREGADILCATRAGAKLLAARIRLMWLEGQETKRP
GYILSLQDVTGDLQVQAERAHLLNDLLDEVDRALPDLPADIPAVQALAARAAETARRKAL
TDTEWWPKEALPASDLGIALTARLARKGITLTTDLPATTLRCDGFAITRLLERLALEWSV
KDATDLQLRLVEIAPASATLALSASGALPDADVLARALDIPLSPGLAQFTGRDVLVTHAT
QLVTAASGMLHLTLSRADPDPAMSARAVLYDFELLHAEVPRAMSEAMLKQLSYVVFDTET
TGLNPQVDEICQIAAVRIVNGKVIDGERFDMLVNPGRRIPQGSIDVHGVTNEMVADAAPV
GEALKRFHAYANGAVLVAHNAPFDMSFLQRRETEIGTRFDQPILDTVLCSAILYGQSADH
TLDALCERLGILIAEADRHTAIGDAIGTAEAFRKMIPMLDAADLPTLGATIKAFDKHSRL
IAHLN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccatctcagcctgcgcctgcgcatcttcattttctttgccgctctggcctgc
ggggccgcgctgcttgtgcttggcgggctgacccttggctatacacgcctgggcgaggat
cacgcgctgtcctctttcgtgattgcgggtgtggtggccgtgtttgcggttgtcgcgctg
atcacctgggtctgggttctgtttgacgaatatatcgcccgccctgtggaacgtctggcc
gccgatatgcgcgcccgtgcccatgcaggcgttggccatgatatcgaccatgcaccggcg
cggtatctgggcgatctggccccggcagcggcagccgtggccgcgaacctgaccgaggcg
cgcaatgccatggcgctgtccatcgggcgtgaaaccgcccggctggggttggagaaaacc
cgactggaaaccttgctggccgaggtgcccgacggggtgttgttctgcacaccggatcat
gtggtggtgctgtataacgggcaggcacgggagatattggaggatcacccggcacttggc
ctgaaccggcctttgtctggcgttctgttacccggcccgatacggcaggcctatgacagg
ctgctggccgccgaggcccgcgagggcgcggatatcctttgtgccacccgggcgggcgca
aaacttctggccgcccggatacggctgatgtggctggaagggcaggaaaccaaacgcccc
ggctatatcctcagcctgcaggacgtgaccggcgatttgcaggtgcaggcggaacgcgcc
catctattgaacgatcttctggatgaggtggaccgggccttgccggatctgcctgccgat
attcctgccgtgcaggctttggcagcgcgcgccgccgaaaccgcccgccgcaaagccctg
accgacaccgaatggtggccgaaagaggcgctgccagccagcgatctgggcatcgcgctg
accgcccgtctggcccgcaaagggattacactcaccaccgatctgcccgccaccacgctg
cgatgtgacgggtttgcaatcacccggctgctggaacggctggctctggaatggtctgtc
aaggatgccactgacctgcagctgcgccttgttgaaatcgctccggcctcggccacgctt
gcgctttcggccagcggcgccctgcccgatgcggatgttctggcacgcgcgctcgacatc
ccgctcagccccggtctggcgcaattcaccggccgtgatgtgctggtgacccatgccaca
cagcttgtcaccgccgcctctggcatgctgcacctgaccctgtctcgcgccgacccggac
cctgccatgtcagcccgcgctgtcctttatgatttcgaattgctgcatgcggaggtgcca
agggcaatgtccgaggccatgctgaaacagttgagctatgtggtgttcgatacggagacc
acgggcctgaacccgcaggtggatgaaatctgccagatcgctgcggtgcggatcgtgaat
ggcaaagtgattgatggcgaacgtttcgatatgctggtcaatccggggcgccggattccg
caaggctcgattgatgtccatggggtgacaaatgagatggtcgccgatgcggccccggtg
ggcgaggcgctgaaacggtttcacgcctatgccaatggcgccgttctggtggcccataac
gcccctttcgatatgagctttctgcaacgccgcgagaccgagatcggcacgcgtttcgat
cagccgatactggatacggtgctgtgttcggccattctgtacgggcaatcggcggatcac
acgctggatgccttatgtgaacggctgggaatcctgatcgcagaggccgaccggcacacc
gcgatcggcgatgcaattggcacggcagaggcgtttcgaaagatgatcccgatgctggat
gcggcagacctgcctacattgggggctacaataaaggcattcgacaaacatagccggctg
attgcgcatctgaattga
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