Rhodophyticola sp. CCM32: E2K80_02295
Help
Entry
E2K80_02295 CDS
T05925
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
boo
Rhodophyticola sp. CCM32
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boo03032
]
E2K80_02295 (ihfB)
03036 Chromosome and associated proteins [BR:
boo03036
]
E2K80_02295 (ihfB)
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_02295 (ihfB)
DNA replication proteins [BR:
boo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E2K80_02295 (ihfB)
Chromosome and associated proteins [BR:
boo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E2K80_02295 (ihfB)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E2K80_02295 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
HU-CCDC81_euk_2
Tim44
Motif
Other DBs
NCBI-ProteinID:
QBX99696
UniProt:
A0A4P7J992
LinkDB
All DBs
Position
457593..457880
Genome browser
AA seq
95 aa
AA seq
DB search
MIRSELIIKLAEENPHLYQRDVERIVNAIFEEIIEAMANGDRVELRGFGAFSVKKRDARI
GRNPRTGESVAVEEKHVPFFKAGKLLRDRLNGHDS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctcggagctgatcattaagcttgcggaagaaaacccgcatctctaccagcgc
gatgttgagcgcattgtaaatgcgattttcgaagagattatcgaggcgatggccaatggt
gaccgggtcgaattgcgtggttttggcgcgttctcggtcaaaaagcgcgatgcccgtatc
ggccgcaatccgcgcaccggtgaaagtgtcgcggtggaagaaaaacatgtgcctttcttc
aaggcgggcaaattgttacgggatcgtctgaacgggcatgacagctga
DBGET
integrated database retrieval system
