Rhodophyticola sp. CCM32: E2K80_02400
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Entry
E2K80_02400 CDS
T05925
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03030
DNA replication
boo03430
Mismatch repair
boo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2K80_02400 (dnaE)
03430 Mismatch repair
E2K80_02400 (dnaE)
03440 Homologous recombination
E2K80_02400 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boo03032
]
E2K80_02400 (dnaE)
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_02400 (dnaE)
Enzymes [BR:
boo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2K80_02400 (dnaE)
DNA replication proteins [BR:
boo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2K80_02400 (dnaE)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2K80_02400 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QBX99713
UniProt:
A0A4P7JAS3
LinkDB
All DBs
Position
483033..486479
Genome browser
AA seq
1148 aa
AA seq
DB search
MSSSPRFIHLRLHTEYSLLEGAMRVKKLPGMVADAGMPAVAVTDSNNMFCALEFSEIAAK
AGVQPIIGCQIDLEYETAAPGDRARPPAAIVLLAQNATGYANLMKLNSALYLRGDGALPH
VTMADLAQHGAGLICLTGGPDGPLGCLLQDGLTTRAAAVLASLKDIYADRLYIELQRHPR
DDASPPEAERLTEAWCVETAYAQGIPLVATNDTYFPKPDMYEAHDALICIAQGAYVDQQE
PRRRLTPQHYFKTPDEMAVLFADLPEALENTVEIARRCAFRARTHDPILPKFAENEVEEL
RRQSREGLEKRLSIIAPATSVDEYEKRLEFELDIIEGMGFPGYFLIVADFIKWAKENAIP
VGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPFMQVDRLSKMIPVEGVKPVSIEKAL
ADEPRLREMAKEEEVVERLLTYGQQVEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSD
MPATQFNMKWVEPAGLVKFDFLGLKTLTVVQNAVDLLQERGVQIDPGLIPLDDEKTYKLY
ASAKTVAVFQVESSGMMDALRRMKPDCIEDIIALVALYRPGPMENIPKFCEVKNNLSDRE
LLHPTIDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADLLRRAMGKKIQEAMDAERPKF
LKGAAENGVDEKTAIEVWNLLDKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAAVM
NCDIHLTDKLSVYKQEIDRLDIETVPPCVNRSAASFTVKEGQVVYALGGLKNVGVEAMKL
IEDSRAETAFATLFDLARRVDLKRIGKRSLEMLARAGAFDDLDRNRARVFDSLDALTAYS
AVIHDQRASDQVSLFGEAGEDLPEPRLPDRDDWLPNERLANEHMAIGFYFSGHPLDDYMP
SLKRKGCLTLAEVEDRVQGGAFVARMAGAVSGRQERKSQRGNRFAFVQLSDPTGLFEVTM
FSDVLEVARDHLDTGANVVLQVEATQEGDSLKLLARGVEPIDDSVASEIGKGLRIFVEEP
DAISMVSGLLARAKGEGKLKGRGPVHLCLMDPDLPGEVEVLLGEDFPVNPQIKGALKSLG
GVMTVEEV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctctccccgattcatccatcttcgtctccataccgaatattcgctgctggaa
ggcgcgatgcgggtcaagaaactgccgggcatggtggccgatgcaggcatgcccgccgtg
gcggtgaccgacagcaacaatatgttctgtgcgctggagttttcagaaatcgctgccaag
gcgggtgtgcagccgatcatcggctgccagattgatctggaatatgaaaccgccgcaccg
ggtgacagggcccgcccgcccgctgccatcgtgctgctggcccagaatgccacgggctat
gccaatctgatgaagctcaactctgcgctctacctgcgcggtgatggtgcgctgccccat
gtcacaatggcggatctggcacagcatggcgccggtctgatctgtctgaccggtggcccc
gacgggccccttggctgtcttttgcaggacggtttgacaacccgcgccgccgccgttctg
gccagcctcaaagacatctatgccgaccgtctgtatatcgaattgcaacgccatccgcgc
gatgatgccagcccgcctgaggccgaacgcctgaccgaggcatggtgcgtcgaaaccgcc
tatgcgcaggggatacccctggtggccacaaatgatacctatttcccgaaacccgatatg
tacgaggcccatgatgcgctgatctgcatcgcccagggtgcctatgtggaccagcaggaa
ccgcgccgccgcctgaccccgcagcattatttcaaaacccctgacgagatggcggttctg
tttgcggacctcccggaggcccttgaaaacacggtggaaattgcccggcgctgtgccttt
cgcgcccgcacacatgaccctattctgccgaaattcgccgaaaatgaggttgaggaactg
cgccgtcagtcccgtgaggggctggaaaagcggctgagcatcatcgcgcccgccacctcg
gttgacgagtatgaaaagcgccttgagtttgagcttgatatcatcgagggcatgggtttc
cccgggtatttcctgatcgtggccgatttcatcaaatgggcgaaggaaaatgccattccc
gtcggtcccggccgtgggtccggcgcgggcagtcttgtcgcctatgcgctgaccatcacc
gatcttgacccgctgcgctattcgcttctgtttgaacgtttcctgaacccggaacgggtg
tcgatgcccgatttcgacattgatttctgcatggaccggcgggaagaggtgatccgctac
gtgcaggagaaatatggccgcgacaaggtgggccagatcatcaccttcggcgcgcttttg
tccaaggcggcggtgcgtgatgtgggccgggttctgcagatgcccttcatgcaggtcgac
cgactgtcaaaaatgatcccggttgagggggtcaaaccggtttccatcgaaaaggcgctg
gccgatgaaccccgcctgcgggaaatggcgaaggaggaagaggttgttgagcgtcttctg
acctatggccaacaggttgaagggcttttgcgcaacgcctccacccatgcggccggtgtt
gtgatcggtgaccgtccgctggacgagctggtgccgctttatcaggacccgcgttcagac
atgcccgcgacccagttcaacatgaaatgggtcgaaccggcgggtctggtgaaattcgat
tttctgggtctgaaaaccctgaccgtggtgcagaatgccgttgatcttctacaggaacgg
ggggttcagattgatccgggcctgatccctctggatgatgaaaagacctataagctttac
gcttctgccaaaaccgtcgctgtgtttcaggtggaaagctcgggcatgatggacgcgctg
cggcgcatgaaaccggactgtatcgaggatatcatcgcccttgtggcgctgtaccgcccc
ggcccgatggaaaacatcccgaaattctgtgaggtgaaaaacaacctttcggaccgggag
cttctgcaccccaccatcgaccatattctggacgagacccagggcattatcgtctatcag
gaacaggtgatgcagattgcgcaagagatggcgggctacagccttggcggcgccgacctg
ctgcgccgggccatgggcaagaaaattcaggaggcgatggatgccgaacgcccgaaattc
ctgaaaggcgcggcagaaaacggggtggacgagaagacagcgatcgaagtctggaacctt
ctcgacaaattcgcaaattacggattcaacaaatcccacgccgccgcctatgcggtggtc
agctatcagaccgcctggctgaaggccaaccatccggttgaattcatggcggccgtgatg
aattgcgatattcatctgacagataaactcagcgtttataaacaagagattgaccggctt
gacatcgaaacggtcccgccttgtgtcaaccggtctgcggctagtttcacggtgaaagag
ggtcaggttgtctatgcccttggtggtctgaagaacgtcggcgttgaggccatgaaactt
atagaagactcccgtgctgagacagctttcgccaccctgttcgaccttgcccgccgggtt
gacctgaaacggatcggcaagcgcagcctggaaatgctggcccgcgccggggctttcgat
gatcttgaccgcaatcgcgcccgggttttcgacagccttgatgcgctgaccgcctattcc
gccgtgatccatgaccaacgtgcctctgatcaggtgtcgctgttcggggaggcgggggag
gatctgcccgaaccgcgcttgcccgaccgcgatgactggctgcccaatgaacgcttggcc
aatgaacatatggccatcggtttctatttctccggccatccgcttgacgattatatgccc
agcctcaaacgtaagggctgcctgacgctggcagaggttgaagaccgggttcagggcggc
gcttttgtggccagaatggccggggctgtatcaggccgacaggaacgcaaaagccagcgg
ggcaatcggtttgcctttgtgcaactctctgatcccacagggctttttgaggtcaccatg
ttcagcgatgtgctggaggttgcccgcgaccatctggataccggcgccaatgtggtgttg
caggtcgaggcgacacaggaaggcgacagcctgaagctgctggcccgcggcgtggagccg
attgatgacagcgtggccagcgagatcggcaagggcttgcgtatttttgtagaagaacct
gacgcgatttccatggtctcgggcctgctggcccgtgcaaagggggagggcaaactgaaa
ggccgcggtccggtccatctctgcctcatggaccccgatctgccgggcgaggttgaggtg
cttctgggcgaggatttccctgtgaacccacaaatcaaaggcgcgctgaaaagccttggc
ggggtgatgacggtggaggaggtttga
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