KEGG   Rhodophyticola sp. CCM32: E2K80_06530
Entry
E2K80_06530       CDS       T05925                                 
Name
(GenBank) conjugal transfer protein
  KO
K20529  type IV secretion system protein TrbD
Organism
boo  Rhodophyticola sp. CCM32
Pathway
boo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:boo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E2K80_06530
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:boo02044]
    E2K80_06530
Secretion system [BR:boo02044]
 Type IV secretion system
  Trb secretion system protein
   E2K80_06530
SSDB
Motif
Pfam: VirB3 Phage_holin_2_3 Phage_holin_3_6
Other DBs
NCBI-ProteinID: QBY00434
LinkDB
Position
complement(1325529..1325798)
AA seq 89 aa
MIDATDIPGFTAPVHRALTMPILLGGAPRTIAIANGTLAAAIGLGLRLWLVGIVFWVVGH
LLAVYAAKRDPQIADVARRHLRYPAWMGV
NT seq 270 nt   +upstreamnt  +downstreamnt
atgattgacgccaccgacattccgggtttcaccgctccagtgcatcgtgcgctcaccatg
ccgattctgcttggcggcgcaccacgcaccatcgcgatcgctaacggcacgctcgcggcg
gccattggacttggcctgagactctggcttgtcggcatcgttttctgggtcgttggccat
ctactggcggtctatgcagcgaagcgcgatccgcagattgccgatgttgcccgccgccac
ctccgttatccagcttggatgggggtgtga

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