Rhodophyticola sp. CCM32: E2K80_09245
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Entry
E2K80_09245 CDS
T05925
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2K80_09245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boo02000
]
E2K80_09245
Transporters [BR:
boo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E2K80_09245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBY00888
UniProt:
A0A4P7JGE4
LinkDB
All DBs
Position
complement(1895811..1897142)
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AA seq
443 aa
AA seq
DB search
MYNNEHDRCKYLSNSNVRKTEANGDAMTFSNKMTRRGMLATTGAATLLGLAPHSAIAQDA
NRGGDLVIAINGASTGNSLDPRTFNSPYMAVVSGTVFNTLVEISGTNAELRPGLALSWEE
SEQGRVWSFNLAPEASFHNGKPVTSADVIYSIMSHGAEGSRSNSRAIIGAIDTLEADGDH
RVIFTLKAPNYFFAPSLSNYSLAIVPEGTTAYDGVGTGPYRITNFVPGEILETERFDGYF
RTDRAFVDTVTLLAANDVSARVNAIQSGQVHIAGNLDARAVPLLQSLPTVDIQFSTGTGF
SGFNMMVDRAPFDNLALRQALKLAIDREDFIQRIYGGHARLGNDNPVPPSAAEFSADVPQ
SVYDPDRAQALYAQSGHSGPIVLQTSDAAGAEAVDGATLFKEHAAAAGIDIQVQREPADG
YWGNVWAQTPFHSTLWGDAQQST
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtacaataatgaacatgatcgctgcaaatatctatccaacagcaatgtcagaaaaacg
gaagcaaatggagacgctatgacattttccaacaaaatgacccgacgtggcatgctggct
accacgggggcagcgaccttgcttggcctcgccccacacagtgccattgcgcaagacgcc
aaccgcggcggcgatctggttattgcaatcaatggcgcgtcaactggcaacagcctagac
ccgcgcacgttcaattcaccatacatggcagttgtcagcgggacggttttcaatacgctg
gtcgaaatctctggtacaaatgccgaacttcggcccggactggcgttgagctgggaagaa
agcgagcagggtcgcgtttggtccttcaatttggcccccgaagcgtcctttcacaatggc
aagcccgtaacctctgccgatgtgatatattcgatcatgtcccatggtgccgaaggcagt
cgttccaactctcgcgccatcatcggagcgattgatacgctggaggcagatggtgaccac
cgtgtcatctttacgctcaaagcaccgaactacttctttgcgccatcgctttccaactat
tcgcttgcaatcgttcccgagggtacgaccgcgtatgacggcgtgggcaccggcccctat
cgcatcaccaattttgtgcccggtgaaatcctcgaaactgagcggttcgatggatatttc
cgcaccgatcgcgcctttgtcgataccgtgacgttgcttgcggccaatgacgtttctgca
cgggtcaacgcaatccaatccggtcaggtgcatatcgcaggaaatctggatgcgcgcgcc
gtcccattgctgcaaagcttgccaacagttgacatacaattctcgaccggcaccggcttt
tcaggctttaacatgatggttgaccgggcacctttcgataacctggcgttgcgccaggca
ttgaagctggccatcgaccgagaagattttattcagcgtatctatggtggccacgcgcgc
cttggcaacgataacccggtgccgcccagcgccgcagaattttcggcagatgtgccgcaa
tccgtctatgatccggatcgtgcgcaggcgctctatgctcagtcgggtcattcgggccca
attgtgctgcaaacctctgatgctgcaggggcagaggctgtggatggtgcgaccttgttc
aaggaacacgcagcagcggctggcatcgatatccaagtccagcgtgagccggccgacggc
tactggggcaatgtctgggcccaaacccccttccactcaacactttggggggacgcccaa
caatcgacctga
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