Rhodophyticola sp. CCM32: E2K80_10120
Help
Entry
E2K80_10120 CDS
T05925
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
boo
Rhodophyticola sp. CCM32
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boo03009
]
E2K80_10120 (rimO)
Enzymes [BR:
boo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E2K80_10120 (rimO)
Ribosome biogenesis [BR:
boo03009
]
Prokaryotic type
ribosomal protein modification factors
E2K80_10120 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBY01038
UniProt:
A0A4P7JGS7
LinkDB
All DBs
Position
2097095..2098468
Genome browser
AA seq
457 aa
AA seq
DB search
MSQNPPDLRPDLARAHVPRDARPGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
DGAEAVIVNTCGFLDSAKAESLDAIGEALRENGRVIVTGCLGAEPDYITGTHPKVLAVTG
PHQYEQVLDAVHTAVPPAPDPFIDLLPGSSVSLTPRHYSYLKISEGCNHKCKFCIIPDMR
GRLASRPAFAVMREAEKLVEAGVQELLVISQDTSAYGVDIRHAEDRGHRAHITDLARDLG
ALGAWVRLHYVYPYPHVRQLIPIMADPSNGLLPYLDIPFQHAHPDVLRRMARPAAAAKTL
DEIAAWRAICPDITLRSTFIVGYPGETEAEFQTLLDWLDEAKLDRVGCFKYENVEGARSN
ALPDHLPEEVKEERFARFMEKAQAISAARLEAKLGQQIEVIIDAVDAEGATCRTKADAPE
IDGNLFIDAGFEALEPGQIVTVEVDEASEYDLWGRLI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacccgccagacctccgcccggatctagcccgggcccatgtgccacgcgac
gcccgaccgggccagcccaccatcggcatggtctctcttggctgccccaaggcgctggtc
gacagtgagcgtattctgacccgccttcgggcggagggatatgcgatttcgcctgattat
gatggggccgaggcggtgattgtgaacacctgcggctttcttgacagcgccaaggccgaa
agcctggacgcgattggtgaagcgctccgcgaaaacggccgggtgatcgtgaccggatgt
ctgggggccgagcctgactatatcaccggcacccatcccaaagtgctggcggtgaccggc
ccgcatcaatatgaacaggtgctggatgcggtgcacaccgccgtgccgcccgcccccgac
ccgttcatcgacctgctgccgggcagcagtgtcagcctgacgccccgccattacagctat
ctgaagatatccgagggctgtaaccacaaatgcaaattctgcatcatccccgatatgcgc
gggcggctggcctcgcgtcccgctttcgcggtgatgcgggaggcggaaaaacttgtagag
gccggggtgcaggaactgctggtgatcagtcaggatacctcggcatatggcgttgatatc
cgccatgcggaagaccggggtcaccgcgcccatatcaccgatctggcccgcgatctgggg
gcgcttggggcctgggtgcggttgcattacgtctacccctacccccatgtgcgccagctg
atcccgatcatggcggacccgtcgaacgggcttctcccttacctcgatatcccgttccag
catgcccatcccgatgtgctgcgccgcatggcgcgcccggccgctgctgcgaaaaccctg
gatgagattgccgcctggcgcgccatctgcccggatatcaccctgcgatccacctttatc
gtcggctaccccggagagacggaagccgaattccagaccctgcttgactggctggacgag
gcaaagctcgaccgggttggctgtttcaaatacgaaaatgtcgagggcgcacggtcaaat
gccctgcccgatcatctgcccgaagaggtcaaggaagagcgtttcgcccggttcatggaa
aaggcgcaggcaatctctgcggcccggcttgaggcgaagctggggcaacagatcgaggtg
atcatcgacgcggttgatgccgagggcgcaacctgccgcaccaaagcagacgcgcccgag
attgacggcaatcttttcatcgacgcggggtttgaagcgctggaaccggggcagatcgtc
accgtcgaggtggatgaggccagcgaatatgacctgtggggccggctgatctga
DBGET
integrated database retrieval system
