Rhodophyticola sp. CCM32: E2K80_10695
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Entry
E2K80_10695 CDS
T05925
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03420
Nucleotide excision repair
boo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2K80_10695
03430 Mismatch repair
E2K80_10695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_10695
Enzymes [BR:
boo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K80_10695
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2K80_10695
MMR (mismatch excision repair)
Other MMR factors
E2K80_10695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QBY01134
LinkDB
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Position
complement(2200633..2203077)
Genome browser
AA seq
814 aa
AA seq
DB search
MSRFDDTDTFEAASLSARAMGAMGAPALSYMDGLNPAQRKAVETLDGPVLMLAGAGTGKT
RALTARIAHLLATHTARPNEILAVTFTNKAAREMKNRVGALMGGAVEGMPWLGTFHAICV
KLLRRHAELAGLKSNFTILDTDDQIRLMKHLILAEGIDEKRWPARMLAGIIDNWKNRAWT
PEHVPEAEAGAYNKRGVALYAAYQARLKTLNAADFGDLLLHVIRIFQENEDVLTQYQRWF
RYILVDEYQDTNIAQYLWLRLLAQDHQNICCVGDDDQSIYGWRGAEVGNILRFDKDFPGA
KIVKLEQNYRSTGHILAAASGVIAGNKNRLGKTLWTEGEDGEKLRLIGHWDGEEEARWVG
DEIEAMTRGTRHMDPITPDQMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIR
DAMAYFRVVVSPEDDLAFERIVNTPKRGLGDVAMQKMQVTARQNGVALIEGARILLDEKG
LGGKGARELARLLDGIKRWRAMLRGPQIAAAPDSDLIEVDSPAGTAPTHIELAEIILDES
GYTGHWQNDKTPEAPGRLENLKELVKALEAFENLQGFLEHVSLIMDNETEDGEAKVTLMT
LHAAKGLEFPAIFLPGWEDGLFPSQRSMDEDGVKGLEEERRLAYVGITRAEEVCTISFAG
NRRVYGQWQSQMPSRFIDELPEAHVEVLTPPGLYGHGGGMSASASPVAQAVDGSDLHRKA
ASADVYNSPGWKRLQANQGNRGIRQPRESRTMTIDSEAVSAFLLGDRVFHQKFGYGQVNA
VEGDKVEVDFDKAGVKHVVARFLVTADGAGDVPF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatttgacgacacagacacgttcgaggccgcgtcgctttccgcccgcgccatg
ggcgccatgggcgcacccgccctgtcctatatggacgggctgaacccggcgcagcgcaaa
gcggtggaaacgcttgacggcccggttctgatgctggcgggggcgggcaccggcaagacc
cgggccctgaccgcccggatcgcccatctgctggccacacacacggcgcggcccaatgaa
attctggcggtgaccttcaccaacaaggccgcgcgcgagatgaaaaaccgcgttggcgcg
ctgatgggcggtgccgttgaaggcatgccctggctgggcaccttccacgcgatctgcgtc
aaactgctccgccgtcatgcggaactggcggggctgaaatccaatttcacgattctggac
accgatgaccagatccggctgatgaaacatttgatcctggccgaggggattgacgaaaaa
cgctggcccgcgcggatgttggccgggatcattgacaactggaaaaaccgcgcctggacg
cctgaacatgtcccggaggccgaggccggggcctataacaaacgcggggtggccctttat
gcggcctatcaggcccggctgaaaacgctgaacgcggccgatttcggcgatctgctgctg
catgtcatccgtatctttcaggaaaatgaggatgtgctgacgcaataccagcgctggttc
cgctatattctggtggatgaatatcaggataccaatatcgcccagtatctctggctgcgg
cttctggcgcaggaccatcagaatatctgctgcgtcggcgatgatgatcagtcgatctat
ggctggcggggcgcggaggtgggcaatatcctgcgctttgacaaggatttccccggcgcc
aaaatcgtcaagcttgagcagaattaccgctccaccgggcatattctggcggccgcctcc
ggcgtgattgcgggcaataagaaccggcttggcaagacgctgtggaccgagggggaggat
ggcgaaaagctgcgcctgatcggccattgggatggcgaggaagaggcccgctgggtcggc
gatgagattgaggcgatgacccggggcacccgccatatggacccgatcacacccgaccag
atggcgattctggtccgggccagccaccagatgcgcgcctttgaagaccggttcctgacc
atcggcctgccttaccgggtgatcggcgggccccggttttacgagcggatggagatccgc
gatgcgatggcctatttccgcgtggtcgtcagccccgaggatgatctggcgttcgagcgg
atcgtgaacactcccaaacgcgggctgggtgatgtggcgatgcagaaaatgcaggtcacg
gcgcggcagaacggtgtggcgctgatcgagggcgcgcggattctgctggatgaaaagggc
ctcggcggcaaaggcgccagggaactggccaggctgctggacggtatcaagcggtggcgg
gccatgttgcgcgggccgcaaatcgctgccgcgccggatagcgacctgatcgaggtggac
agccccgcaggcaccgcccccacccatatcgaactggccgaaatcatcctcgacgaaagc
ggctataccggtcattggcagaacgacaagaccccggaagcgcccgggcggctggaaaac
ctgaaagaactggtcaaggcgctggaagcgttcgaaaaccttcagggtttcctcgaacat
gtctctctcatcatggataatgaaaccgaggatggagaggcgaaagtcaccctgatgacg
cttcacgccgccaaggggctggaatttcccgcgatttttctgccgggctgggaagacggg
ctgttccccagccagcgctcgatggatgaggatggggtaaagggtctggaggaggaacgc
cgcctggcctatgtgggcatcacccgcgccgaggaggtctgcacgatttcctttgccggc
aaccgccgggtctatggccagtggcaaagtcagatgccctcccgctttattgatgaactg
cccgaggcccatgtggaggtgctgacaccgccgggcctgtatggccatggcgggggcatg
tcggccagcgcatcgcccgtggcccaggccgtggacggctcggatctgcaccggaaagcg
gccagcgcagatgtctataattccccgggatggaaacgtttacaggccaatcagggcaat
cgcggcatccgccagccgcgcgaaagccgcaccatgaccatcgacagcgaggcagtcagc
gcattcttgctgggcgaccgggtgtttcatcaaaaattcggatacgggcaggtgaatgcg
gtagaaggggacaaggtcgaggtcgatttcgacaaggccggtgtgaaacatgtggtggcc
cggtttctggtcacggcggatggcgcgggcgatgtgccgttctga
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