KEGG   Rhodophyticola sp. CCM32: E2K80_11050
Entry
E2K80_11050       CDS       T05925                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
boo  Rhodophyticola sp. CCM32
Brite
KEGG Orthology (KO) [BR:boo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boo03400]
    E2K80_11050
Enzymes [BR:boo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E2K80_11050
    5.6.2.6  RNA 3'-5' helicase
     E2K80_11050
DNA repair and recombination proteins [BR:boo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E2K80_11050
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QBY01196
UniProt: A0A4P7JD56
LinkDB
Position
2277212..2279623
AA seq 803 aa
MTMLPPDITDWFRTRGWSLHSHQQQMLDLSSAPCQLLIAPTGGGKTMAGFLPTLAELADG
THQGLHTLYISPLKALAADIKRNLRAPVEDIGLPIRIEDRTGDTTQTQRKRQRADPPHIL
LTTPESLALLTSYEDAGHMFAGLQRVIVDEIHALAESKRGDQLMLALSRLSTLAPGLRRV
GLSATVEDPPAIARILARHPDPCRILEADPGPDPDISMLETDARPPWSGGGGRYAIPAVL
DQVKRHKTTLIFHNTRAQAEIFFHHLWLANDDQLPIGIHHGALSREQREKVEAAMVAGDL
RAIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALMVPANRFEV
IECIAALEAARDHDLDGEPKGDGPLDVLCQHILIRAAAGPFLADDLYEEVTSAGAYASLP
RESFDRCLDFCATGGYALKAYDRWQKLVQRPDGAWQLRDPRASRQIRMNIGTILASDKLK
VRLKHARGGMPLGEVEENFAASLVKGDTFLIGGQIVRYEGLREMTIEVTRSPSDRPKVAT
FMGSKFATSTQLSDRILAMFRQDDWPALPRHTRDWLALQRRVSRLPERDRLLVESFPHDG
RDHVCVYGFAGKNAQQTLGLLLTQRMEEEGLHPLGFVSTDYATLIWGLDPLQDAAPLFSR
ETLTRTMEIWLSGNAVMKRTFKGAAIIAGLIDRNMPAGKRKTGRQATFSTDILYDTLRKY
DPGHVMLEITRVEAMRGMVDFGRIDAMLTRIGDRIDHVKLPRLTPLAAPLFLEVGKVPVK
GRAEHRLIEEEAARLLTTAGLPL
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgacaatgctgcccccggacatcacagattggttccgcacccgagggtggagcctccat
tcgcatcagcaacagatgctggacctgtcatccgcgccctgccagttgctgatcgcgccc
accggcggcggcaagaccatggccgggttcctgcccacgctggcggaacttgccgatggc
acgcatcagggcctgcacacgctttacatctctcccctgaaggcgctggcggcggatatc
aaacgcaacctgcgcgccccggtggaagatatcggcctgcccatccgtatcgaggatcgc
accggcgacaccacccagacccaacgcaaacggcaacgcgccgatccgccccatatcctg
ctgaccacgccggaaagtcttgcgctgcttacgtcatatgaagatgcgggccatatgttt
gccgggctgcaacgggtcattgtcgatgagattcacgcgctggcggaaagcaaacgcggc
gatcagctgatgctggcgctgtcgcgtctgtccaccctggcaccgggtctgcgccgtgtg
gggctcagcgccacggtggaagacccgcccgccatcgcccgcattctggcccgccatccc
gatccctgccggatactggaggcagatcccggccccgacccggatatctcgatgctggaa
accgacgcccgcccgccctggtccggcggcggcgggcgctatgcgattccggccgtgctg
gaccaggtcaaacgccacaagaccaccctgattttccacaacacccgcgcccaggccgag
atcttctttcatcatctctggctggccaatgacgaccaactgccgatcggcatccaccat
ggcgccctgtcacgtgaacaacgcgaaaaggtcgaggccgcaatggtcgccggggatctg
cgcgccatcgtctgcaccgggtcccttgatctgggcatcgactggggcgatgtggatctg
gtcattcaggtcggcgccccgaaaaacgtcaaacggctggtccagcggatcgggcgcgcc
aatcaccgctacaatgcgccctcgaaggcgctgatggtccctgccaaccggttcgaggtt
atcgaatgcatcgcagcgctggaggccgcccgcgaccatgatctggatggagagccgaaa
ggcgacggcccgcttgatgtgctgtgccagcatatcctgatccgcgccgcagccgggcca
ttcctggccgatgatctctatgaagaggtcacctcggccggggcctatgccagcctgccc
cgcgagagtttcgaccgctgtctcgatttctgtgccacgggggggtatgcgctcaaagcc
tatgatcgctggcagaaactggtgcagcgcccggatggcgcctggcagttgcgcgacccc
cgcgccagccgccagatccgcatgaatatcggcaccattctggcctctgacaaactgaag
gtccgcctgaaacacgcaaggggcggcatgcccctgggcgaggtggaggagaatttcgcg
gcgagccttgtcaaaggcgatacgtttctgatcggcggtcagatcgtgcgctatgagggc
ctgcgcgagatgaccatcgaggtcacacgcagcccgtcggacaggcccaaggtcgccacc
ttcatgggcagcaaatttgccacctccacccagttgtctgatcgtattctggcaatgttc
cggcaggatgactggcccgccctgccccggcacacccgtgactggctggccctgcagcgg
cgcgtctcccgcctgccggaacgtgatcggttgctggtcgaaagcttccctcatgacggg
cgcgaccatgtctgcgtctacgggtttgcgggcaagaatgcgcaacagaccctgggcctg
cttctgacccagaggatggaggaagaagggctgcacccgcttggtttcgtctccaccgat
tacgccacgctgatctgggggctggacccgttgcaggatgcagccccgttgttttcccgt
gagaccctgacccggacgatggaaatctggctgtcgggcaatgcggtgatgaaacgcacc
ttcaagggcgcggccatcatcgccgggctgatcgatcgcaacatgcccgccggcaaacgc
aagaccggccggcaggcaacgttttccaccgatatcctctatgacacgctgcgcaaatat
gaccccggccatgtgatgctggaaatcacccgggtcgaggcgatgcgcggcatggtcgat
ttcgggcgcatcgacgcgatgctgacccggatcggtgatcgcatcgaccatgtgaaactg
ccccggctgaccccgctggccgcgcccttgtttcttgaggtcggcaaagtgccggtgaaa
ggacgcgccgaacaccgcctgatcgaagaggaagccgcccgcctgctgacgacagcgggt
ttgccgctatag

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