Rhodophyticola sp. CCM32: E2K80_15905
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Entry
E2K80_15905 CDS
T05925
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
boo
Rhodophyticola sp. CCM32
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boo03016
]
E2K80_15905
Enzymes [BR:
boo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E2K80_15905
Transfer RNA biogenesis [BR:
boo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E2K80_15905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBY02030
UniProt:
A0A4P7JJ29
LinkDB
All DBs
Position
3262974..3263585
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AA seq
203 aa
AA seq
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MTIHTYQNDLPDGLKLGPVVAIDCETMGLNPHRDRLCLIQLSDGDGNAHLVQVAKGQTDA
PNLTAMLADPDVLKLFHFGRFDIAAMYHAFGTLAAPVYCTKIASKLVRTYTDRHGLKYLC
QELLGIDISKQQQSSDWGAETLSEAQKSYAASDVLYLHRLREELDIRLTREGRTDLAEAA
FGFLPTRARLDLAGWPEIDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatccatacataccagaatgatctgcccgacgggctgaaacttggcccggttgtc
gccattgattgcgaaaccatggggctgaacccgcatcgtgaccggctgtgcctgatccag
ttgtcagatggtgacggaaacgcccatctggtgcaggtcgccaaaggccagaccgacgcc
ccgaacctgaccgcaatgctggccgacccggatgtgctgaaactgtttcatttcggccgc
ttcgatatcgccgcaatgtatcatgccttcggcacgctggcagccccggtctattgcacc
aagatcgcctcgaaactggtgcggacctataccgaccggcacgggttgaaatacctttgt
caggaacttctgggcatcgacatctcgaaacagcaacaaagctcggactggggtgccgaa
acgctgagcgaggcgcagaaatcctatgcggcgtctgatgttctgtacctgcacaggctg
cgcgaggaactggatatccgcctgacccgcgaaggacgaaccgacctggcagaggccgct
ttcgggtttctgccaacccgggcccggcttgatctggcgggctggcccgaaatcgacata
ttcgcccattaa
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