Rhodophyticola sp. CCM32: E2K80_16530
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Entry
E2K80_16530 CDS
T05925
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E2K80_16530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boo02000
]
E2K80_16530
02044 Secretion system [BR:
boo02044
]
E2K80_16530
Transporters [BR:
boo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
E2K80_16530
Secretion system [BR:
boo02044
]
Type I secretion system
Multiple protein transporter
E2K80_16530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
MMR_HSR1
AAA_21
RsgA_GTPase
MeaB
AAA_30
AAA_22
AAA_18
AAA_23
AAA_28
AAA_33
nSTAND3
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QBY02143
UniProt:
A0A4V1BRC0
LinkDB
All DBs
Position
3387725..3389461
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AA seq
578 aa
AA seq
DB search
MASTTQQHASSGIDELTRQRRANSGLFWAIFLFSIFTNLLMLTGPLYMLQVYDRVLGSRS
EETLLALSLLVTFLFLMMGLLDYARGRVAARVGARLQDGLDSPVFAAALSRARRKGGPQT
GLQDLEAVQRLLSSPAFLALFDIPWTPLFLAAIFIFHPWLGWLALSGGALLVMITLINQA
MTREPLKASGVASMRADRMAGQLQSEAELIRSLGMQGAAFRRWRGQREQALGAAIRSSDR
VGGFTTLTKTLRLFLQSAMLGLGAYLVLQAELTAGAMIAGSILLGRALAPIELAIGQWAV
IQRARDGWTNLRQLLGETPPEPQRLPLPRPAAKLDVHQLAVVPPGESQAMLRMVSFRVDP
GQAVGIIGPSGAGKSTLAKALTGVWLPAAGQIRLDGATLDQYDPDILGGLVGYLPQTVSL
FDGTIAENIARLSPNPDPDAVVAAAQKAAAHELILKQPKGYDTPVTSIGSRLSGGQIQRI
GLARALYGNPVLLVLDEPNSNLDNEGSAALNQAIREMKSDGRSVLIMAHRPAAIRECEML
LVLDGGMPKMFGPRDEVLKKTVQNHAQINASGTGGGVS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccacacaacagcacgcttcgtcaggtatagatgagctgacgcgccagcgc
cgtgcaaattccgggcttttctgggcgattttcctgttcagcatttttaccaacctgctg
atgctgaccgggccgctttacatgttgcaggtctatgaccgtgtgctgggcagccggtct
gaagaaacattgctggccctgtccctgctggtgacctttctgtttctgatgatggggctg
ctggattacgcccgtggccgggtcgccgcacgggtgggcgcgcgtttgcaggatgggctg
gattcgccggtttttgccgccgccctgtcgcgtgcacgccgcaagggcgggccgcaaacg
gggttgcaggatctggaagcggtgcagcggctgttatcctcgcccgcctttctggcgctg
tttgatatcccctggacgccgctgtttctggcagcgattttcatattccatccctggctt
ggctggctggctctgagcggcggggcgcttctggtgatgatcaccctgatcaatcaggcg
atgacgcgggagccgttgaaagcatccggtgttgcctccatgcgggccgaccggatggcc
gggcagttgcagtccgaggctgaactgatccgcagcctgggcatgcagggtgccgccttt
cgccgctggcgggggcagcgcgaacaggcccttggcgccgcgatccggtccagcgaccgg
gtcggcgggtttacgacgctgaccaaaacgctgcgcctgtttctgcaatcggcgatgctg
ggtcttggggcgtatcttgtcttgcaggcggagctgacggcgggcgcaatgattgccggg
tcgatccttctgggccgggctttggcgccgatcgaactggccattggccaatgggcggtg
atccagcgggcgcgcgatggctggaccaatctgcgccagcttctgggcgaaaccccgcca
gagccacagcgcctgcccttgccccgcccggctgcaaagctggatgtgcatcaactggcc
gtggtgcccccgggggaaagccaggcgatgttgcggatggtcagttttcgggtcgatccg
gggcaggccgtgggcattatcggcccctcgggtgcggggaaatccacccttgcgaaagcc
ttgaccggggtctggttgccggccgccgggcagatccgtctggatggcgcgacgctggat
cagtatgacccggatattctggggggactggtgggctatctgccgcagaccgtcagcctg
tttgacggcacgattgccgaaaatatcgcgcgcctgtcgcccaaccccgacccggatgcc
gtggtggccgccgcgcagaaggccgcggcccatgagctgattctgaaacagcccaaaggc
tatgacacgccggtcacctccatcgggtcgcgcctgtcaggcgggcagatacagcgtatc
ggcctggcccgcgcgctttatggcaacccggtgctgctggtgctggatgaaccgaactcg
aatcttgataacgagggcagcgcggccctgaaccaggcaatccgcgagatgaaatctgat
ggccgctcggttctgatcatggcccacagacccgccgcgatccgcgaatgtgagatgctg
ctggtgctggatggggggatgccgaagatgtttggcccgcgcgacgaggtcttgaagaag
accgtgcagaaccatgcccagatcaacgcaagcggcactggcgggggggtcagctga
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