Rhodophyticola sp. CCM32: E2K80_16590
Help
Entry
E2K80_16590 CDS
T05925
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K80_16590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boo03019
]
E2K80_16590 (recQ)
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_16590 (recQ)
Enzymes [BR:
boo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K80_16590 (recQ)
Messenger RNA biogenesis [BR:
boo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2K80_16590 (recQ)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2K80_16590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QBY02154
UniProt:
A0A4P7JH50
LinkDB
All DBs
Position
3399016..3401058
Genome browser
AA seq
680 aa
AA seq
DB search
MQDPESYLSSVFGFENFRPGQEEIVRAVAAGKNTLAIMPTGGGKSLCFQLPALMQDGVTV
VISPLIALMRDQVRGLRTAGVEAGALTSGNTAEETDAVWTGLEAGTLKLLYIAPERLAAS
GTERMLKRAGVALIAVDEAHCVSQWGHDFRPDYLRIGGLRQALDVPLAAFTATADAETRA
EIVDRLFDGTPPEIFLRGFDRPNLTLAFEVKNSPRAQILSFAAARKGQSGIVYCGTRAKT
ETIAKALRDDGHSACHYHAGMAAEDRRIVETRFSREDGLIVVATIAFGMGVDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGAPADTLTLYGPDDIRFRRQQIDEGLAPGDRKTADHGRL
NALLGLAEALGCRRQVLLGYFGETTEPCGNCDLCATPPDTFDGTQPVRKALSAILRTGEY
FGAGHLIDILIGNTTEKITQRGHDTLPTFGVGMEFDKRGWQAVFRQMAAHDLVRPDPDRF
GALRMTEAARPILKDEATITLRKDALARAPRRPAVKTLVSEEDAPLLSALKAKRRALAEE
ARVPAYVIFPDRTLIEMAETRPATLDQMAQVSGVGAKKLESYGRTFLEVITGDIPDIPHP
ARRKLSGQKAGGLYDRLLEVQARLARGPRGLDKPMRCSSAQLARVAEAQPGDLGSLTRLL
GDRHAERFGAAFLEVLSEAG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccccgagagttatctctcctccgtttttggtttcgaaaacttccgccccggg
caggaagagattgtgcgtgcggtggcggcgggcaagaacacgctggcgatcatgccgaca
gggggcgggaaatccctgtgtttccaattgccggccctgatgcaggatggggtgacggtt
gtcatctcacccctgattgcgctgatgcgcgatcaggtgcgcggcctgcgcacggcgggg
gttgaggcaggcgcgctgacctcgggcaatacggccgaggaaaccgatgcggtctggacc
gggcttgaggccggcacgctgaagctgctttatattgcgcccgaacggctggccgcctcg
ggcacggagcggatgctgaaacgcgcgggcgttgccctgatcgccgtggatgaggcccat
tgcgtcagccagtggggccatgatttccgccccgattacctgcggatcggcgggttgcga
caggcgctggatgttccgcttgcggcctttaccgccaccgcagatgccgaaacccgggcc
gagattgtcgaccgcctgttcgatggcaccccgccggagatctttctgcgcggctttgac
cggccgaacctgacactggcgtttgaggtcaagaacagcccgcgcgcgcaaatcctcagc
ttcgcggcggcgcgcaagggccagtcaggcattgtctattgcggcacgcgggcaaagacc
gaaacgattgccaaagcgctccgcgatgacggccacagcgcctgccactatcatgcgggg
atggcggcggaggatcggcgcattgtcgagacccggttcagccgcgaggacgggttgatt
gttgtggccaccatcgctttcggcatgggcgtggacaaacccgatatccgctgggtggcc
catgcggatctgccgaaatccatcgaaggctattatcaggagatcgggcgcgcgggccgt
gatggcgcgcccgcggacacgctgacgctttatggccccgatgatatccgctttcgccgc
cagcagatcgacgaaggtcttgcgcccggggatcgcaaaaccgccgatcacgggcgactg
aatgcgcttctgggtctggccgaggcgcttggctgccgccgtcaggtcttgctgggctat
ttcggtgagacaaccgaaccctgcggcaattgcgatctttgcgccaccccgccggacaca
ttcgacggcacccaaccggtgcgcaaggcgctttcggctatcctgcgcacgggggagtat
ttcggcgcgggccatctgatcgacatcctgatcggcaataccaccgagaagatcacccag
cgcggccatgacaccctgcccacattcggcgttggcatggaatttgacaaacgcggctgg
caggcggtgttccggcagatggccgcccatgatctggtgcgccccgacccggatcggttt
ggcgcattgcggatgaccgaggccgcccgcccgatcctgaaggatgaggcgacaatcacc
ctgcgcaaggatgcgctggccagggcgccgcgccgcccggcggtgaaaaccctggtgtcc
gaggaagacgccccgcttctttcggcgctcaaggccaaacgccgggctctggccgaagag
gcacgggtgcccgcctatgtcatcttccccgaccgcaccctgatcgagatggcggaaacc
cggcccgccaccctggaccagatggcgcaggtttccggggtcggcgcgaaaaagctggaa
agctatggccggacctttctggaagtcatcaccggagatatccccgatattccccacccc
gcccggcgcaaactgtcgggccaaaaggcgggcggcctctatgaccggcttctggaggtt
caggcccgtctggcgcgcgggccccggggtctggacaaaccgatgcgctgttcctccgcg
caactggcccgggtggccgaggcacagccgggcgatctgggaagtctgacgcggcttctg
ggggatcgccatgcagaacgttttggcgcggcgtttctggaagtgttgagcgaggcgggc
tga
DBGET
integrated database retrieval system
