Rhodophyticola sp. CCM32: E2K80_16880
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Entry
E2K80_16880 CDS
T05925
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K80_16880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boo03019
]
E2K80_16880 (pnp)
03016 Transfer RNA biogenesis [BR:
boo03016
]
E2K80_16880 (pnp)
Enzymes [BR:
boo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E2K80_16880 (pnp)
Messenger RNA biogenesis [BR:
boo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E2K80_16880 (pnp)
Transfer RNA biogenesis [BR:
boo03016
]
Prokaryotic type
tRNA degradation factors
E2K80_16880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QBY02207
UniProt:
A0A4P7JFE8
LinkDB
All DBs
Position
3457859..3459994
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AA seq
711 aa
AA seq
DB search
MFNEVKKSMEWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKSPKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKHEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAGARVGYEDGEYILNPTVDDMHQLRMNPDQR
LDLVVAGTKDAVMMVESEAYELTETEMLGAVNFAHEQIQPVIDLIIALAEDAAKEPFDFQ
APDFSDLSAAVKAAGEEKIRAAYAITDKQDRTTALSEAKAAIIEALTEEQQEDANLGSAL
KKLEASVLRGDVVKTGKRIDGRALDTVRPIVSEVGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQMIDALHGTFRSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSPVAGVAMGLILEDDGSYA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILNE
MANALTEGRSEFSAHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIK
IASANADSIAKAYEMIHSIVAEPEEGKIYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIEN
RRLNHPSDVLKEGQEVWVKLLGFDDRGKVRLAMKMVNQDTGEEQAREEAAD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaagtaaaaaaatccatggagtggggcgaagaaacgctgacactcgaaacg
ggtaaggttgcccgccaggccgatggctcggtcattgcaacccttggtgaaaccagcgtc
atggccaatgtgaccttcgccaaatcccccaagccggggcaggatttcttcccgctgacc
gtgcattatcaggaaaaatattatgccgccggtaaagtgccaggcggttttttcaagcgt
gaggcacgcccgacggaaaaggaaacgctgaccgcccggttgatcgaccggccgatccgt
ccgctgttcgtgcccggcttcaaacatgaagtgctggtgatgtgcaccgtgctgagccat
gatctggtcaatgacccggatatggttgcgatgattgccgcatcagccgcgctgacgatt
tcgggcgcgcccttcatgggcccgattgccggtgcccgcgtgggctatgaggatggcgaa
tacatcctgaacccgacggttgatgacatgcatcagctgcgcatgaaccccgatcagcgt
ctggaccttgttgttgccggcaccaaggacgcggtgatgatggtcgaatccgaagcttat
gagctgaccgagaccgaaatgcttggcgcggtgaatttcgcccatgagcagattcagccg
gtgatcgacctgatcatcgcgctggccgaagacgccgcaaaagagccgtttgacttccag
gcaccggatttttccgatctctctgctgccgtgaaagccgcaggtgaggaaaaaatccgc
gccgcctatgcgatcaccgacaagcaggaccggaccaccgccctgtcagaagccaaagcc
gcgatcatcgaggccttgacagaagagcagcaggaagatgccaatcttggctctgccctg
aaaaagcttgaagcctctgtgctgcgtggcgatgtggtcaaaaccggcaaacgtatcgac
ggtcgtgcgctggatacagtgcgccccatcgtgtccgaggtcggcatcctgccgcgcacc
catggctcggccctgttcacccggggggagacacaaggcctggtggtcaccacattgggc
accggcgatgacgagcagatgatcgatgcgctgcatggcacgttccggtccaatttcctt
ttgcattataacttcccgccctattcggtcggtgaagccggtcgtgtgggccctccgggc
cggcgtgaaatcgggcatgggaaactggcctggcgtgcgttgcaggccgttctgcccgcg
cccacggatttcccctacacgatccgcgttgtctccgagatcactgaatccaacggctct
tcctccatggcgtccgtctgcggtgggtcgctgtcgatgatggatgcgggtgtgccgctg
aaatcaccggtggccggtgtcgccatgggtctgattctggaggatgatggctcttacgcg
gttctgaccgacatcctgggggatgaagaccacctgggcgatatggatttcaaggttgcg
ggcaccgaaaacggcatcacatccctgcagatggatatcaaggttgcgggcatcacgccc
gagatcatggagaaggctctggcccaggctaaagacggccggatgcatatcctgaacgag
atggccaatgccctgaccgaaggccggtcggaattttcggcccacgccccgcggattgag
acgatgcaggtgcccaccgacaagatccgtgaagtgatcgggtccggtggcaaggtcatc
cgcgagattgtcgaggtgtcgggtgccaaggtcgatatcaacgatgatggcatcatcaag
atcgcctcggccaatgcggattcgatcgccaaagcctatgagatgatccattccatcgtg
gccgagcccgaggaaggcaaaatctacaaaggcaaggtcgtgaagatcgtcgatttcggc
gccttcgtgaatttcttcggcaaacgcgacgggctggttcatgtcagccagatcgaaaac
cgccgtctgaaccacccttccgacgtcctcaaagagggtcaggaagtctgggtcaaactt
cttggcttcgatgatcgcggcaaggtgaggctggcgatgaaaatggtcaaccaggacact
ggcgaagaacaggccagggaggaggcggccgactaa
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