Rhodophyticola sp. CCM32: E2K80_17250
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Entry
E2K80_17250 CDS
T05925
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03030
DNA replication
boo03430
Mismatch repair
boo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2K80_17250
03430 Mismatch repair
E2K80_17250
03440 Homologous recombination
E2K80_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boo03032
]
E2K80_17250
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_17250
Enzymes [BR:
boo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2K80_17250
DNA replication proteins [BR:
boo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2K80_17250
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2K80_17250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
RuvB_N
AAA_16
AAA_19
AAA_14
AAA_18
DUF815
Rad17
AAA_24
Glyco_tranf_2_5
SLFN-g3_helicase
DUF5837
TsaE
AAA_assoc_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QBY02268
UniProt:
A0A4P7JJX0
LinkDB
All DBs
Position
complement(3533960..3535714)
Genome browser
AA seq
584 aa
AA seq
DB search
MTDIPDTGYQVLARKYRPETFADLVGQEAMVRTLRNAFAADRIAQAFILTGIRGTGKTTT
ARIVAKGLNCVGADGKGGPTTDPCGLCEPCRAIAEGRHVDVMEMDAASRTGVGDIREIID
SVHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEEMIALMRKIATSEGAEIADDALALITRAAEGSARDATSLLDQAISHGA
GGTTADQVRAMLGLADRGRVLDLFDMIMTGDAPGALNELGAQYADGADPMAVLRDLAEVT
HWLSVIKITPEAANDPTVGPDERARGQGLAERLAMRVLSRMWQMLLKALEEVALAPNPMM
AAEMAVIRLTHVADLPPPGDLVRKLSNTPAPSTAAPPAAGGSARAPDAPPSAPPQGHAPS
SPRAQGGAQPALAELSETALAHYPGFASVVALIEANRDIKLLIEVKTTLRLVSYQPGRIT
FQPTERAPADLAQRLGQSLKGWTGVRWAVTIANEGGAATLEEQQNAGLAALKAEAEALPM
MQAVRAAFPEAEITEIRTRDEIAAMAAVEALPEVNEEWDPFEDD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatacccgacaccggctatcaggttctggcgcggaaataccgccccgaaacc
tttgccgatcttgtcggtcaggaggcgatggtcagaacccttagaaacgccttcgccgct
gaccggattgcgcaggctttcattctgaccggtatccggggcaccggcaaaaccaccacc
gcacggattgtcgccaagggcctgaactgtgtcggggccgatggcaagggcggcccgaca
acagacccttgcggtctttgtgagccctgccgggccattgccgagggccgccatgtggat
gtgatggagatggacgcagcctcgcgcaccggggtcggcgatatccgcgagatcattgat
tcggtgcattaccgggctgcctcggcccgctacaaaatctatatcatcgacgaggttcac
atgctgtcgaccagcgccttcaacgcgctgctgaagacgctggaagaaccgcccgcccat
gtgaaattcatcttcgccacaaccgagatccgcaaagtgccggtcacggttctgtcgcgc
tgccagcggttcgatctgcgccggatcgaacccgaagagatgatcgcactgatgcgcaag
atcgcaacatccgaaggggccgagattgccgatgacgcgctggcgctgatcacccgcgcg
gcggagggttcggcccgcgacgccacctcgcttctggatcaggcgatttcccacggggcc
ggtggcaccacggcagatcaggtgcgcgcaatgctgggcctggcggatcggggccgggtt
ctggacctgttcgacatgatcatgaccggcgatgcccccggcgccttgaacgagcttggg
gcgcaatatgcggacggggccgacccgatggcggttttgcgcgatctggccgaggtcacc
cattggctgagcgtgatcaagatcacaccagaggccgcgaatgacccgaccgtcgggccg
gatgaacgcgcccggggtcaggggctggccgagcgtctggcgatgcgggtgctcagccgg
atgtggcaaatgctgctgaaagcgctggaagaggtggccctggccccgaacccgatgatg
gccgccgaaatggcggtgatccgcctgacccatgtggccgatctgccgccgcccggcgat
ctggtgcgcaaattgtccaacacgcccgccccatcaaccgccgccccacctgctgcgggc
ggttccgcgcgggcgcccgatgcaccgccatccgccccgccgcagggccatgccccgtca
tcgccccgggcgcagggcggtgcgcaaccggcactggccgaactctctgaaacggcgctg
gcccattaccccggcttcgcaagtgttgttgcgctgatcgaggccaatcgcgatatcaaa
ctgctgatcgaggtgaaaaccacgctgcgtctggtgtcttaccagcccgggcggatcacc
tttcagccgaccgagagggccccggccgatctggcccagcgtctggggcaaagcctgaaa
ggctggaccggtgtgcgatgggccgtaaccatcgccaatgaaggcggggccgcaaccctt
gaggaacagcagaatgccggtctggccgcgctgaaagcagaggccgaggcgcttccgatg
atgcaggccgtgcgcgccgccttccccgaggcagagatcaccgagattcgcacccgtgac
gagattgcggcgatggccgccgtcgaagcgctgcccgaagtgaatgaggaatgggacccg
tttgaggatgactga
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