Rhodophyticola sp. CCM32: E2K80_18055
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Entry
E2K80_18055 CDS
T05925
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
boo
Rhodophyticola sp. CCM32
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_18055 (addB)
Enzymes [BR:
boo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K80_18055 (addB)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E2K80_18055 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QBY02847
UniProt:
A0A4P7JGY0
LinkDB
All DBs
Position
3678689..3681646
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AA seq
985 aa
AA seq
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MFEPTDKPRLFATPLGVDFTAALIDGVEARLQGQPPEALARVEIYVNTARMQRRLTAQFA
QRRASFLPRIRPVTDLAARPDMAGLPPAMSPLRERLQLSQLIARLLDQRPDLAPRAALYA
LADSLADLMGEMQEERVTPGMLHNLDVGDHAQHWQRSQAFLSIVAPFFAGDDSLTVEARH
SAIVDRLARLWQTAPPDHPVIVAGSTGSRGVTARLMRAVAGLPQGAVVLPGLDYDMPDTV
WQGLLQGRAMGLGGEDHPQYRLGRFATDLGLAPGAVPVWGAVSPPHPLRNRLISLALRPA
PVTDQWREEGPKLGDLTGAVAGLTLIEAPTPQAEATAIALRLRQAAEDGQTAALISPDRT
LTRQVTAALDRWQILPDDSAGQPVALTAPGRLLRHVAEAMATRPNAEALLVLLKHPLCHS
GRDGRGQHLLRSRDLELQVLRGGGPYLERADLMVWAGARDSDPGAVDWAVWLADLLLVDP
AIGAVPFADHVARHLALAGALAAGPGDDAETRTGALWEREDGQTAGRLMQAVAADADAGG
DLTPVEYRDLISAVLQDAEARNPVRPHAHIMIWGALEARVQGADLMILAGLNEGIWPAAP
GADPWLNRAMRAEAGLRLPDRQIGLSAHDFQQAVAGNEVWLSRSRRDAETETVPSRWLNR
LLNLMEGTGEGAHAALKEMRARGDIWLARAEALGTPEAPVDPAPRPSPCPPVAARPARLS
VTQIEKLVRDPYAIYALKVLGLKPLDPLRQTPDARLRGTTLHAILRRFIKATDAGLPEAA
EDLFNRLTAEALEQEVPWPVARRLWQARMARIAPWFVTTERDRRAFAAPHLLEIKGKLTF
PETGFTLSGTADRLDRTADGALAIYDYKTGSVPSADQERYFNKQLWLEAMMARGGAFGDA
RQVARIAYIGLGSGGRLLTHEVTDAEIDLIATEFDALLTHYAEPATGYTARRAMAELRYA
GDYDHLARYGEWDETTPPQSEEVGG
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
ctgtttgagcccacagacaaaccccggctgttcgccaccccgcttggggttgatttcacc
gccgccctgatcgacggggtcgaggcccgtttgcagggtcagccgcccgaggcgctggcg
cgggttgagatttatgtcaacaccgcccgcatgcagcgccgcctgaccgcgcagtttgca
cagcgccgggccagctttctgccccgcatccggccggtgaccgatctggccgcgcgaccg
gatatggccgggctgcccccggcgatgtcaccgcttagggagcgcctgcaactcagccag
ctgattgcccggctgctggatcagcgccccgatctggcgccgcgcgcggcactttatgcg
ctggccgacagcctggccgatctgatgggggagatgcaggaagaacgggtaacgcccggg
atgctccataatctggatgtgggtgatcatgcgcagcactggcaacgcagtcaggcgttc
ctgtccatcgtcgcgccgtttttcgcgggcgatgacagcctgacggtcgaggcgcgccat
tcggccattgttgaccggctggcccggctctggcagaccgcgccgccggatcatccggtg
atcgtggcaggctccaccgggtcgcgcggggtgacggcccggctgatgcgggcggtggcg
ggcctgccgcaaggggcggtggtgctgccggggctggattatgacatgcccgatacggtg
tggcagggtctgttgcagggccgcgccatgggtctgggcggggaggatcacccgcaatac
cgtctggggcgctttgccaccgatttggggctggccccgggggcagtgccggtctggggt
gcggtctcacccccgcatccgctgcgcaaccggttgatatcccttgccctgcgcccggcc
ccggtgaccgatcagtggcgtgaggaaggtccgaaactgggtgatctgaccggggcggtg
gccggtctgacgctgatcgaggcgcccacgccccaggccgaggcgaccgcgattgccctg
cgcctgcgtcaggccgccgaagacgggcagaccgccgcgttgatcagccccgaccggacc
ctgacccggcaggtgaccgccgcgctggaccgctggcagatcctgcccgatgacagcgcc
gggcagcccgtggcgctgaccgcgccggggcgtctgctgcgccatgtggccgaggcgatg
gcgacccgcccaaatgccgaagcgctgctggtgctgctgaagcatccgctgtgccattcg
ggccgcgatggccggggccagcacctgctgcgcagccgcgatctggaattgcaggtgctg
cgcggcggtggcccctatctggagcgtgccgatctgatggtctgggccggggcgcgcgac
agtgatccgggggctgtggactgggctgtctggcttgccgatctgctgctggtggacccc
gctatcggggctgtgccatttgccgatcatgtggcgcggcatctggcgctggccggggct
ttggccgcggggccgggcgatgatgcagagacgcggaccggcgcgctatgggagcgtgaa
gacggccagacggcagggcgtctgatgcaggcggttgcggccgatgcggatgcggggggt
gatctgacgccagtggaataccgggacctgatcagcgcggttttgcaggacgcggaggcc
cgcaaccccgtccgcccccatgcgcatatcatgatctggggcgcgttggaggcccgggtg
cagggcgcggatctgatgatactggcggggctgaacgaaggtatctggcccgccgccccc
ggcgccgacccctggctgaaccgggcgatgcgggccgaagccgggttgcgcctgccggac
cggcagatcggcctgtccgcccatgatttccagcaggcggtggcgggcaatgaggtctgg
ctgagccggtcgcgccgggatgcggagaccgaaaccgtgccctcgcgctggctgaaccgg
ttgctgaacctgatggaggggaccggcgagggcgcgcacgcggccctgaaagagatgcgg
gcgcggggggatatctggctggcccgggccgaggcgcttgggacgcctgaggccccggtt
gacccggccccgcgcccgtcgccctgcccgcccgtggcggcgcggcccgcccggctttcg
gtcacccagatcgaaaaactggtgcgcgacccctatgcgatctatgcgctgaaagtgctg
gggctgaaacctctggacccgctgcgccagacccctgatgcccgcctgcggggcacgaca
ttgcatgcgatcctgcgccgcttcatcaaggccaccgatgcgggcctgcccgaggcggca
gaggatctgttcaaccgcctcaccgccgaggcgctggaacaggaggtgccctggcccgtg
gcgcggcgtctgtggcaggcgcgcatggcgcgcatcgcgccctggtttgtgacgaccgag
cgggacaggcgcgcctttgccgccccccatctgcttgagataaaggggaaactcaccttc
cccgaaacggggttcacgctcagcggtacggcggaccggctggatcgcaccgctgacggg
gcgctggcgatttacgattacaagaccggttcggtgccctccgccgatcaggagcgctat
ttcaacaaacagctctggctggaggcgatgatggcccggggcggggcctttggcgatgcc
aggcaggtcgcgcggatcgcctatatcgggctgggcagcggtggcagattgctgacccat
gaggtcaccgatgccgagattgacctgatcgccacagagttcgacgccttgctgacccat
tacgccgaacccgccaccggctacaccgcgcgccgcgccatggccgaattgcgctatgcg
ggtgattacgaccatctggcgcgctatggcgaatgggatgaaaccaccccgccccaatcc
gaagaggtgggcggatga
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