Rhodophyticola sp. CCM32: E2K80_18140
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Entry
E2K80_18140 CDS
T05925
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo00061
Fatty acid biosynthesis
boo00071
Fatty acid degradation
boo01100
Metabolic pathways
boo01212
Fatty acid metabolism
boo02024
Quorum sensing
boo04146
Peroxisome
Module
boo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E2K80_18140
00071 Fatty acid degradation
E2K80_18140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E2K80_18140
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2K80_18140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
boo01004
]
E2K80_18140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boo04147
]
E2K80_18140
Enzymes [BR:
boo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E2K80_18140
Lipid biosynthesis proteins [BR:
boo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E2K80_18140
Exosome [BR:
boo04147
]
Exosomal proteins
Exosomal proteins of breast milk
E2K80_18140
Exosomal proteins of breast cancer cells
E2K80_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBY02851
LinkDB
All DBs
Position
3701816..3703783
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AA seq
655 aa
AA seq
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MTAAAGIPASVPALLARNVAQFGSKPAYREKEFGIWQTWSWAEAAEEIDAIAYGFLALGV
NRGDHIAVIGRNRPALYWSMVAAEKVGAIPVPLYQDAVAEEMTYVLGHCGARFVIAGDQE
QVDKVIEVQETVTCIEHIIYQDARGLRKYDHSKLHALADIQAEGRAAHERFAGELITREG
ELGWNSTCVMLYTSGTTGKPKGVVLSNENIIATSKNSAEFDDLRPGDEVLAYLPMAWVGD
FIFSIGQAMWTGFCVNCPESPETMMSNLREIGPTYYFAPPRVFETQLTNVMIRMEDAGNF
KKRMFRYFMDHAKRVGPALLDGKPVGAVDRLKYRLGEMLVFGPLKNTLGFTRVRVGYTAG
EAIGPEIFDFYRSLGINLKQLYGQTEASVFITQQPDHEVRPDTVGVPSPGVEIRIAETGE
VFYRSPGVFVEYYKNAESTASTKDADNWVATGDAGFIEPDTGHLRIIDRAKDVGKMADGR
LFAPKYVENKLKFFPNILEAVVLGNGRDHCTAFINIDLTAVGNWAERNNIAYASYQELAG
HPQVLDTLQTHVEEVNRSLAQDEMLSGCQIHRFLVLHKELDADDGELTRTRKVRRRIIEE
KFEDLIAALYDGSGSVYTETEVTYEDGRKGKIAATLAIRDAEIADEVTDQKVAAE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ataaccgcggctgcgggtattcccgcatctgttccggcgcttctggcgcggaacgtggcg
caattcggttcaaaacccgcctaccgggaaaaggaattcggcatctggcagacctggtcc
tgggccgaggcggccgaggagattgacgccattgcctatggctttctggcccttggggtg
aaccggggggaccatattgcggttatcgggcgcaaccggcccgcgctttactggtcgatg
gtggccgccgagaaggtgggggcgatcccggtgccgctgtatcaggatgctgttgccgaa
gagatgacctatgtgctgggccattgcggcgcgcgttttgtgatcgccggggatcaggag
caggtcgataaggtcatcgaggtgcaggaaacggtcacctgcatcgaacatatcatctat
caggatgcgcgcggtctgcggaaatacgaccattccaaactgcatgcgctggccgatatt
caggccgagggtcgggccgcccatgaacgtttcgcgggggagctgataacccgcgagggg
gaacttggctggaacagcacctgtgtgatgctgtatacgtcgggcaccacgggcaagccc
aagggcgtggtgctgagcaatgaaaacatcattgccacctccaagaattctgccgaattt
gatgatctgcgcccgggcgacgaggtgctggcctatctgcctatggcctgggttggcgat
ttcatcttttccatcggtcaggcgatgtggacggggttttgtgtgaactgccccgaaagc
cccgagacgatgatgtccaatctgcgcgagatcgggccgacctattattttgcgccgccc
cgcgtgttcgagacacagctgaccaatgtgatgatccgcatggaggatgcaggcaatttc
aagaaacgcatgttccgttatttcatggatcacgccaaacgggtcggccctgctttgctt
gacggcaagccggtgggcgcggtggaccggctgaaataccggcttggtgagatgctggtc
tttggcccgctgaaaaacacccttggcttcacccgggtgcgggtcggctatacggcgggg
gaggcgatcgggccggaaattttcgatttctaccggtcgctcgggatcaatctgaaacag
ctttacggccagaccgaggccagcgttttcatcacccagcaacccgatcatgaggtgcgc
ccggatacggttggcgtgccctcccccggtgtggaaattcgcatcgccgagactggcgag
gtgttctatcgctctcccggggtgttcgtggaatattacaagaatgccgaaagcaccgcc
tcgaccaaggatgcggataactgggtggccacgggggatgcggggttcatcgaacccgat
accgggcatttgcggatcatcgaccgggccaaggatgtgggcaaaatggcggatggccgt
ctgtttgcaccgaaatatgtcgagaacaagctgaaattcttcccgaatattctggaggct
gtggttctgggcaatggccgtgatcattgcaccgcctttatcaatatcgacctgaccgcc
gtgggcaactgggccgagcggaacaatatcgcctatgcctcctatcaggaactggccggg
catccacaggtgctggatacgcttcagacccatgtggaagaggtgaaccggagtttggcg
caggacgagatgctgtcgggctgccagatccaccggtttctggtgctgcacaaggaactg
gatgccgatgacggggaactgacccggacccgcaaggtgcgccgccggatcatcgaagag
aaattcgaggatctgatcgccgcgctctatgacgggtccggcagcgtctataccgagacc
gaagtgacctatgaggacgggcgcaagggcaagatcgccgcgacgctggcaattcgtgac
gccgagattgccgatgaggtcacagatcagaaggtggccgccgaatga
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