Rhodophyticola sp. CCM32: E2K80_18405
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Entry
E2K80_18405 CDS
T05925
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2K80_18405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boo02000
]
E2K80_18405
Transporters [BR:
boo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E2K80_18405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_29
DUF87
AAA_16
NACHT
FtsK_SpoIIIE
SbcC_Walker_B
PRK
AAA_25
UxaC
MMR_HSR1
Beta-barrel_RND
Motif
Other DBs
NCBI-ProteinID:
QBY02466
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Position
3753710..3755419
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AA seq
569 aa
AA seq
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MTLLSVRDLRVGFGKPGREKAVVHGVDLDLAAGETLAIVGESGSGKSVTAMSINRLVDYG
GGRILGGSITLDGVTDLVQVSEAEMRALRGREIGMIFQEPMTSLNPVLKIGTQIGEIFVK
RHGLSRHDARKAAIRALDRVRIPDAARRLDQAPHQMSGGMLQRIMIAMALAGEPRLLIAD
EPTTALDVTIQAQILALLSELKHETGTGLIFITHDIGLVAGIADRVAVMQQGRVVETGPA
DTVFDHPRHEYTHHLLNAVPHFRQGAAAREGSERGSGASPVLKVDDLGIRFPVGGEFLRP
SKGFVHAVDGVSFDLLPGETLGIVGESGSGKSTTARAILDLITPTMGHVEGATGRAVQMV
FQNPNASLNPRMTVRALLAEPVIAAGHPVDKGAEDRMRMLLKKVDLPEESLSRYPHEFSG
GQKQRICIARVLMPDPKILVLDEAVSGLDVSVQARVLDLLIDLQRDFGLAYLFVSHDMGV
VEQIAHRIAVIYAGRIVEIGESRSVLSDPRHPYTRKLIAAVPSIDRRHVDFTVETDEVPS
TMRPAGWEPAPQDWETHGPDHVFAVEALR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgctgtcggtcagggacctgcgggtgggcttcggcaaaccggggcgggagaag
gcggtcgtgcatggcgtcgacctcgacctcgctgcgggcgagacccttgcgattgtcggc
gaaagcgggtcgggcaaatcggtgacggcgatgtcgatcaaccgattggtcgattatggc
ggcggacgcattctgggcggctcgatcaccctcgatggcgtcaccgatctggtacaggtg
tcggaggccgagatgcgggccttgcgcgggcgcgagatcggcatgatttttcaggagccg
atgacatcgctcaatccggtcctcaagatcggcacccagatcggggagattttcgtcaag
cgccacggcctcagccggcacgacgcgcgcaaggccgcgatccgggcgctggaccgggtg
cgcatccctgatgccgcgcggcggctggatcaggcaccccatcagatgtcgggcgggatg
ctgcagaggatcatgatcgccatggccttggccggtgagccgcgcctgttgatcgcggat
gagccgaccaccgccctcgacgtgacgatccaggcgcagatcctcgcgctcctgtccgaa
ctgaagcatgaaaccggtaccggtctgatcttcatcacccacgatatcggccttgtcgca
gggatcgcggatcgggtcgcggtgatgcagcaaggacgggttgtggaaaccgggccggcg
gacactgtattcgaccatccgcgccatgagtatacccaccaccttctgaatgcggtgccg
catttccggcagggcgccgccgcgcgcgaaggctcggaacggggaagcggggcgtcgcct
gtgctgaaggtcgatgaccttggtatccggtttccggtgggtggcgaatttctgcgtccg
tcaaaaggtttcgtacatgccgtcgacggggtgtccttcgatcttctgccgggggaaacg
cttgggattgttggcgaaagcggctcgggcaaatccacgaccgcgcgcgccatcctcgac
ctcatcacgccgacaatgggccatgtggagggggccacaggccgcgcggtgcagatggtc
ttccagaatcccaacgcctccctcaatccgcggatgacggtccgcgccctcttagctgag
ccggtgatcgccgcgggtcatcccgtcgacaagggggccgaggatcgcatgcggatgctc
ctgaaaaaggtcgatttgccagaggaatcgttgagccgctatccacacgaattttcgggt
ggccagaagcaacggatctgcatcgcgcgggtcttgatgcccgacccgaagatcctggtg
ctggacgaggccgtctcgggccttgacgtctcggttcaggcgcgggtgctggatcttttg
atcgatctgcaacgcgatttcggcctcgcctatcttttcgtgtcccacgacatgggcgtg
gtcgagcagatcgcacatcggatcgccgtcatctatgccgggcgtatcgttgaaatcgga
gagtcccgctcggtcctgtcggatccgcgccatccctacacacgcaagctgattgccgcc
gttccgtcgatcgaccgccgtcacgtggatttcacggttgaaaccgatgaggtcccgtcc
accatgcggcccgccggatgggaacccgcgccacaggattgggaaacccacgggccggac
catgtttttgcggtcgaggcacttcggtga
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