Bosea sp. PAMC 26642: AXW83_04035
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Entry
AXW83_04035 CDS
T04264
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bop
Bosea sp. PAMC 26642
Pathway
bop03410
Base excision repair
bop03430
Mismatch repair
bop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXW83_04035
03430 Mismatch repair
AXW83_04035
03440 Homologous recombination
AXW83_04035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bop03400
]
AXW83_04035
DNA repair and recombination proteins [BR:
bop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AXW83_04035
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AXW83_04035
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AXW83_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2214
Motif
Other DBs
NCBI-ProteinID:
AMJ59584
UniProt:
A0A126NRM6
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All DBs
Position
848040..849845
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AA seq
601 aa
AA seq
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MSLTLPRAFLGVTRSALGRPWRDRLDAAGLGRAEALAQVEGMPDILARVLAGRGVEAADA
ARFLEPKLRDLLPDPASLAGMEAAAARLARAAQSGEAVAIFGDYDVDGACSSALLAEFLE
AAGARPRIHIPDRLIEGYGPNAEAIRMLVGEGATLLVTVDCGTTSHEPLAEAARLGLDVV
VLDHHQAPERLPEVAALVNPNRQDDLSGLGHLCAAGVVFLTLVATRAALRQQGFWANQAA
EPDLLAALDLVALATVADVVPLTGLNRAFVRQGLAMLRGRTRPGLAALMDVAGLDGPVQP
WHLGFLLGPRINAGGRIGDAALGARLLRTQDAIEARGLAGELNRLNQERQEIERQAVLEA
TAEADHALMNAPDQPVLLAGSLDWHPGIVGLVAARLKERFRRPAFALALNGEGGATGSGR
SVPGVDLGRAVRKAVEAGLALKGGGHAMAAGVTLGPGQTEAFHAFLIDHLAAEFGATDSA
QALLVDAAMSAGGANPRLLAELDRAGPYGQGAPEPVFVFPSHRLTDVVEIGSGGHIRIKL
RSGDGATVGGIAFRAAQEPLGQALLAARGDSVHLAATLSLNRWGGNETAELRVLDMALPG
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcaccctcccgcgtgcctttctcggcgtcactcgctccgcgctcggtcgcccc
tggcgcgacaggctggatgcggccggcctcggccgggccgaagcgctggcgcaggtcgag
ggcatgcccgacatcctcgcccgtgtgcttgccggccgcggcgtcgaggctgctgacgcc
gcccgcttcctcgagccgaagctgcgcgacctcctgcccgaccccgcctcgctcgccggc
atggaggccgccgccgcccgcctcgcccgggccgcgcagtcgggcgaggcggtcgccatc
ttcggcgactacgatgtcgacggcgcctgctcctcggcgctgctggccgagttcctggag
gcggccggcgcccgcccgcgcatccacatccccgatcggctgatcgagggctacggcccc
aatgccgaggccatccggatgctggtaggcgagggcgcgaccttgctggtcaccgtcgat
tgcggcaccaccagccatgagccgctggccgaggccgcgaggctgggactcgacgtcgtc
gtgctcgaccaccaccaggcgcccgagcggctgccggaggtcgcggcgctggtcaatccc
aaccggcaggacgatctctcgggcctcggccatctttgcgctgccggtgtcgtcttcctg
acgctggtcgcgacccgcgccgccctgcgccagcagggtttctgggccaaccaggctgcg
gagcccgacctgctggcagccctcgacctcgtcgcgcttgcgaccgtcgccgacgtcgtg
ccactgaccggcctcaaccgcgccttcgtccggcaaggcctcgccatgctgcgcgggcgc
acgcggcccggccttgcggccttgatggatgtcgcgggcctcgacgggccggtgcagccc
tggcatctcggctttctgctcggcccgcgcatcaatgccggcgggcgcatcggcgatgcc
gcgctcggtgcccgcctgctgcgcacgcaggacgcgattgaggctcgcggcctcgcgggc
gaactcaaccgcctgaaccaggagcgtcaggagatcgagcgccaggccgtgctggaggcg
acggccgaggccgaccacgcgctgatgaacgcacccgatcagccggtgctgctcgcaggc
tcgctcgactggcatccaggcatcgtcggattggtggcggcgcggctgaaggagcgcttc
cgccgccccgccttcgcactggccctgaacggggagggcggcgccaccggctcgggccgt
tcggtccccggcgtcgatctcggccgggcggtgcgcaaggctgtggaagccgggctcgcg
ctgaagggtggcggccacgctatggcggcgggcgtcacgctcggccccggacagacggag
gccttccacgccttcctgatcgaccatctcgctgccgaattcggcgcgaccgattcggcg
caggccctgctggtcgatgccgcgatgagcgccggtggtgccaatccgcgcctgctggcc
gaactcgaccgggcagggccctacggccagggcgcgcccgaacccgtcttcgtcttcccc
tcgcatcgcctgaccgatgtggtcgagatcggcagcggcggccatatccgcatcaagctc
aggagcggtgacggcgcaactgtgggcgggatagccttccgtgcggcccaggaacccctc
ggccaggccctgctcgccgcccgcggcgacagcgtccatctcgccgcgaccttgtcgctg
aaccgctggggcggcaacgagaccgccgaactgcgcgtcctcgacatggccctgccggga
ctttga
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