Bosea sp. PAMC 26642: AXW83_08655
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Entry
AXW83_08655 CDS
T04264
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bop
Bosea sp. PAMC 26642
Pathway
bop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXW83_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bop03021
]
AXW83_08655
03400 DNA repair and recombination proteins [BR:
bop03400
]
AXW83_08655
Enzymes [BR:
bop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXW83_08655
Transcription machinery [BR:
bop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXW83_08655
DNA repair and recombination proteins [BR:
bop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXW83_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_RND
ApbA_C
BSH_YknX
DUF8806
Motif
Other DBs
NCBI-ProteinID:
AMJ60352
LinkDB
All DBs
Position
complement(1829522..1833730)
Genome browser
AA seq
1402 aa
AA seq
DB search
MKQEVMNLFGQQPVQQAFDAIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKFKGVICEKCGVEVTLARVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLMDMPLKDLERILYFESYVVIEPGLTPLKDRQILSEEEYVRCQEEYGADTFTA
MIGAEAIREMLRALDLDQINADLKHEIATTTSELKPKKLMKRLKIIEAFQQSGNKPEWMV
MTIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSTTVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGLPIIVPSQDIVLGLYYLSIVSDGEPGQGKIFGDIGELEYALH
EKVVTLHSKIKYRWTGVGADGKDYTKIYDTTPGRVILSTALPRHPNMTFDVSNRLMTKKE
ISGMIDAVYRGCGQKESVIFCDRIMSLGFTHAFKAGISFGKDDMVIPENKWEIVDTTRVL
AKDYEQQYQDGLITQGEKYNKVVDAWAKCSDKLAQEMMARISTVKKDKNGRDLPINSIYM
MSHSGARGSPAQMKQLAAMRGLMAKPSGEIIESPIISNFKEGLDVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDAIISEVDCGSESGIKMRAIIDAGQVVASLGIRILGRSA
AEDVTDIDGKVLVPKGTMIDEAHIEAINAAGVQEVKIRSVLTCATKNGVCATCYGRDLAR
GTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAATIADQSFTESNFEGTVRIRNSNLA
RNSDGDLIAMARNIAVVIVGPDGAERAVHRVQFGSKLRVDEGDKVKRGQRLIEWDPYSRP
ILAEVDGSVGYEDLVDGMSITETTDEATGINKRVVIDWRGSARTSDLRPALTVHGPDGKI
AKLARGGEARYILPVEGIISMEPGAMIKAGDVLARVSTDSAKTRDITGGLPRVAELFEAR
RPKDAAIIAEKAGVIGFGKDYKNKRRVTLTPHDGSEGLEYLIPKGKHIHLQDGDVVEMGD
YILDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVGINDKHIEVIVRQMLQKVEITE
SGDTDILTGDQVDRIELREINQKMAEEGKKPASGVPVLLGITKASLQTRSFISAASFQET
TRVLTEAAVNGKYDTLEGLKENVIVGSLIPAGTGAQVARIKQVATRRDDLIVGQKADAAA
RAAASAAKAAAAAVAAALPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagaggtcatgaatctctttgggcagcagccggtgcagcaggcgttcgatgcg
atccgcatctcgatcgccagcccggagaagatcctgtcctggtcatacggcgagatcaag
aagccggagaccatcaactatcggacgttcaagccggagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
ttcaagggcgtcatctgcgaaaagtgcggcgtcgaagtcacgctcgcccgcgtccggcgc
gagcgcatgggccatatcgaactcgccgcgcctgtcgcccatatctggttcctgaagtcg
ctgccctcgcgcatcggcctcttgatggacatgccgctcaaggatctcgagcgcatcctc
tatttcgagtcgtatgtcgtcatcgagccgggcctgacgcccctcaaggaccgtcagatc
ctgtccgaggaggagtatgtccgctgccaggaagagtacggcgccgacaccttcaccgcc
atgatcggcgcggaagccatccgcgagatgctgcgcgcgctcgacctcgaccagatcaac
gccgatctcaagcatgagatcgcgacgacgacgtcggagttgaagcccaagaagctgatg
aagcgcctcaagatcatcgaggccttccagcagtcgggcaacaagccggaatggatggtc
atgaccatcgtcccggtgatcccgcccgatctgcgcccgctggtgccgctcgatggcggc
cgcttcgcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgcccgacatcatcatccgcaacgaaaagcggatg
ttgcaggagtcggtcgacgcgctgttcgacaacggccgtcgcggccgcgtcatcacgggt
gccaacaagcgcccgctgaagtcgcttgccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtcgtgggt
ccggagctgaagctgcaccagtgtgggctgcccaagaagatggcgcttgagctgttcaag
ccgttcatctatgcgcgcctcgacgccaagggctactcgaccacggtcaagcaggccaag
aagctggtcgagaaggagaagccggaggtttgggacatcctggacgaggtcatccgcgag
catccggtgatgctgaaccgcgcgccgacgctccaccgcctgggcatccaggccttcgag
ccgacgctgatcgagggcaaggcgatccagcttcacccgctggtctgcgccgccttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctggaagcgcagctg
gaggcgcgcgtcctgatgatgtcgaccaacaacatcctacacccggccaatggtcttccg
atcatcgtgccgtcgcaggacatcgttctgggcctgtactacctctcgatcgtctccgac
ggcgagccgggccagggcaagatcttcggcgacatcggcgagcttgaatatgcgctgcac
gagaaggtcgtgacgctgcattccaagatcaaataccgctggaccggcgttggggccgac
ggcaaggactacaccaagatctacgacaccacgcccggccgcgtcattctctcgacggca
ctgcccaggcacccgaacatgaccttcgacgtcagcaaccgcctgatgacgaagaaggaa
atctcgggaatgatcgacgccgtctatcgcggctgcggtcagaaggagtcggtgatcttc
tgcgaccgcatcatgtcgctgggcttcacgcacgccttcaaggccggcatctcgttcggc
aaggacgacatggtgatccccgaaaacaagtgggagatcgtcgatacgacgcgcgttctc
gccaaggattacgagcagcagtaccaggacggcctgatcacccagggcgagaagtacaac
aaggtcgtcgacgcctgggcaaagtgctccgacaagctcgcccaggagatgatggcgcgc
atctcgaccgtgaagaaagacaagaacggtcgcgatctgccgatcaactcgatctacatg
atgagccattcgggtgcgcgcggttcgccagcccagatgaagcagctcgcggcgatgcgc
ggcctgatggccaagccctcgggcgagatcatcgagtcgccgatcatctcgaacttcaag
gaaggcctcgacgttctcgagtacttcaactcgacccacggcgcccgcaagggcctcgcc
gataccgcgctgaagacggccaactccggctatctgacgcgtcgtctcgtcgatgtggcg
caggatgcgatcatctccgaagtcgattgcggctcggagagcggcatcaagatgcgcgcc
atcatcgatgcgggccaggtcgtcgcctcgctcggaatccgcatcctcggccgttcggcc
gcggaggatgtcaccgatatcgacggcaaggtcctggtgccgaagggcacgatgatcgac
gaggcgcatatcgaggcgatcaacgctgccggcgtgcaggaagttaagatccgttcggtg
ctgacctgcgccaccaagaacggcgtctgcgcgacctgctacggacgcgatcttgcccgc
ggcacgcccgtcaacatgggcgaggccgtcggcgtcatcgcggcgcagtcgatcggcgag
ccgggtacgcagctcaccatgcgcaccttccacatcggcggcgctgccacgatcgccgac
cagtccttcaccgagtcgaacttcgagggcacggtcaggatccgcaacagcaacctcgcc
cgcaattcggacggcgacctcatcgccatggcgcgcaacatcgccgtggtgatcgtggga
ccggacggggcggagcgcgcggtgcaccgggtccagttcggctcgaagctgcgggtcgac
gagggcgacaaagtcaagcgcggccagcgcctgatcgagtgggatccctattcccgcccg
atcctggcggaggtcgacggctccgtcggctacgaggacctggtcgacggcatgtcgatc
accgagacgaccgacgaggcgacaggcatcaacaagcgcgtcgtcatcgactggcgcggc
tcggcccgtacgtcggatctgcgtccggcgctgacggtgcatggaccggacggcaagatc
gccaagctcgcccgtggcggcgaagcgcggtacatcctgccggtcgagggcatcatctcg
atggagccgggcgcgatgatcaaggccggcgacgtgctggcccgcgtctcgaccgactcg
gccaagacccgcgacatcaccggcggtctgccgcgggtggcggagctgttcgaggcgcgt
cgtcccaaggatgcggcgatcatcgcagagaaggccggcgtgatcggcttcggcaaggac
tacaagaacaagcgccgcgttacgctgaccccgcatgacggctcggaagggctcgagtac
ctgatccccaagggcaagcacatccatctccaggacggcgacgtcgtcgagatgggcgac
tacatcctcgacggcaatccggccccgcacgacatccttgcgatcaagggcgtcgaggag
ttggcggcttatctggtgaacgagatccaggaggtctatcgcctccagggcgtgggcatc
aacgacaagcacatcgaggtcatcgtccggcagatgctgcagaaggtcgagatcaccgaa
tccggcgataccgacatcctgaccggcgaccaggtcgaccgcatcgaattgcgcgagatc
aaccagaagatggcggaagagggcaagaagcccgcctccggcgtgcctgtcctgctcggc
atcaccaaggcgagcctgcagacgcgttcgttcatctcggcggcgtcgttccaggagacc
acccgcgtcctcaccgaggcggcggtcaacggcaagtacgatacgctggaaggcctcaag
gagaacgtcatcgtcggctcgctcatcccggccggcaccggcgcccaggtcgcccgcatc
aagcaggtggcgacgcgtcgcgacgatctcatcgtcggccagaaggccgatgctgcggcc
cgtgccgcggcttcggctgcgaaggccgcggctgctgccgtcgcagcggcgttgcccgca
gcggagtga
DBGET
integrated database retrieval system
