Bosea sp. PAMC 26642: AXW83_10865
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Entry
AXW83_10865 CDS
T04264
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
bop
Bosea sp. PAMC 26642
Pathway
bop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXW83_10865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bop03021
]
AXW83_10865
Transcription machinery [BR:
bop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXW83_10865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AMJ60724
LinkDB
All DBs
Position
complement(2298100..2300151)
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AA seq
683 aa
AA seq
DB search
MATKASEREKTDQVAPEAPPTSDGPLLDLTDQAVRRMIKLAKKRGYVTYDELNEVLPSEE
FSSEQIEDVLGQLSEQGINVVDNEDPEASGEERAAARTGAGGDEEEPEGGELAETQRSAL
PVEVKRNLEPTERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLT
FQAIIIWRDELNDAKVLLRDIIDLEATYAGPDGKNPAQLPGEGGEGAEPGVPGTPAEGAA
AEGEVPEGELPSDLDDDDIENNVSLSAMEAELKPRVLETFDSIADNYKKLRRLQDQDIAN
RLENTKLSPSQDRKYKKLKDDIITAVKSLSLNNNRIEALVEQLYDINKRLIGHETRLLRL
AESYGVGREDFLKQHVGGELDPKWVLRVSKLGSRGWRDFVGAELDRIKSLRDEIHTLASE
TGLEIQEFRKIVLMVQKGEREARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQM
LHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAIL
PIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQI
EAKALRKLKHPSRSRKLRSFLDN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaagcgagcgaacgggaaaagaccgaccaggtcgcaccggaagcccccccg
acttccgatggaccgttgctcgatctgaccgatcaggccgtaaggcggatgatcaagctc
gcgaagaagcgcggctatgtcacctatgacgaactgaacgaggttctgccttcggaggag
ttttcctccgagcagatcgaggacgtgctcggccagctcagcgagcagggcatcaacgtt
gtcgacaacgaagaccccgaagcctccggcgaggagcgcgcagccgcgcgcaccggcgcg
ggcggcgacgaggaagagcccgagggcggcgaactcgccgagacgcagcgctcggcgctg
cccgtcgaggtcaagcgcaatctcgagccgacagagcgtaccgacgatccggtgcggatg
tatctgcgcgagatgggctcggtcgagctgctttcccgcgaaggcgaaatcgccatcgcc
aagcgcatcgaggccggccgcgaggcgatgatcgcaggtctctgcgagagcccgctgacc
ttccaggcgatcatcatctggcgcgacgagctcaacgacgccaaggtgctgctgcgcgac
atcatcgatctcgaagcgacctatgccggccctgacggcaagaacccggcgcaactgccg
ggcgagggcggcgaaggggcagagcccggcgtgcccggtactccggccgagggcgcggcc
gccgagggtgaggtacctgaaggcgagttgccgtcggatctcgacgacgacgacatcgaa
aacaacgtctcgctttcggcgatggaagccgaactcaagccgcgcgtgctggagacgttc
gactcgatcgccgacaattacaagaagctgcgccgcctgcaggaccaggacatcgccaac
cggctggagaacaccaagctctcgccgtcgcaggaccgcaaatacaagaagctcaaggac
gacatcatcaccgcggtgaagtcgctctcgctgaacaacaaccgcatcgaggcgctggtc
gagcagctctacgacatcaacaagcgcctgatcggccacgagacccgcctgctgcggctg
gccgagagctatggcgtcggccgcgaggacttcctcaagcagcatgtaggcggcgagctc
gatccgaaatgggtgctgcgcgtctccaagctgggatcgcgcggctggcgcgacttcgtc
ggagcggaactcgaccggatcaagagcctgcgcgacgagatccatacgctcgcctcggag
accggcctggaaatccaggagttccgcaagatcgtgctgatggtccagaagggcgagcgc
gaggccaggcaggccaagaaggagatgatcgaggcgaacttgcgtctcgtgatctcgatc
gccaagaagtacacgaaccgcggcctgcagttcctggatctcatccaggaaggcaatatc
ggcctgatgaaggcggtcgacaagttcgagtaccgccgcggctacaagttctcgacctat
gcgacgtggtggatccggcaggccatcacgcgttcgatcgccgaccaagcccgcacgatc
cgcatcccggtccatatgatcgagacgatcaacaagatcgtgcggacctcgcgccagatg
ctgcacgagatcggccgcgagccgaccccggaggagctggccgaaaagctcgccatgccg
ctggagaaggttcgcaaggtcctcaagatcgccaaggagccgatctcgctcgaaacgccg
atcggcgacgaggaggattcgcatctcggcgacttcatcgaggacaagaacgcgatcctg
ccgatcgatgcggcgatccagagcaatctgcgcgagacgacgacgcgcgttctggcctcg
ctcaccccgcgcgaagaacgcgtgctgcggatgcgcttcggcatcggcatgaacaccgac
cacaccctcgaagaggtcgggcagcagttcagcgtgacgcgcgagcgcatccggcagatc
gaggcgaaggcgctgcggaagctgaagcatccgagccggagccggaagctcaggagcttc
ctggataattga
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