Allobosea sp. PAMC 26642: AXW83_16000
Help
Entry
AXW83_16000 CDS
T04264
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bop
Allobosea sp. PAMC 26642
Pathway
bop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AXW83_16000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bop03400
]
AXW83_16000
Enzymes [BR:
bop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AXW83_16000
DNA repair and recombination proteins [BR:
bop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AXW83_16000
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXW83_16000
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXW83_16000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
ExoI_SH3
DUF179
Motif
Other DBs
NCBI-ProteinID:
AMJ61610
LinkDB
All DBs
Position
3318110..3319525
Genome browser
AA seq
471 aa
AA seq
DB search
MSFIFYDLETSGLAPQWDVPLQAALIHADADLKIQAELSFRARLPAHIVPSPGALLVTGV
TPAMLEQAPLSVGDMLGLIARAFNEWAPATIVTYNGLRFDEEVLRHAFFTHLLPPYSSQG
PGLKRADLLVMLRAVRLLEPNAVTIPIGVNGKPSMKLGDVCRANGIALHEEDAHDALADT
RATLALFRHLREVAPSTIARMLENTHKSGPAALLAGDEPILLGGMNAMVPVIGIAPSPRN
AAAWAVADLSVDPATYLDGSLEEIAALLTAKGPRAIRTVRTNAQPILVGWERGAHALPAD
RLDDAVYRQRARQVRDHAGFRKNLLQALANQYADAEPSPWPEATLYSGGFISDEQMRLSR
RWREIDWVERPAFADQLFTDARLRAFSNRLCFLEAAEHLSPAAWAKSRDWLRHRLQTEDD
VPWLTLSKALKEIDGLRAQTEAGDDERLRQIAEIERWLVGRQQELARASAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcatcttctacgacctcgaaacctccggcctcgccccgcaatgggatgtgccg
ctgcaggccgccttgatccacgccgatgccgatctgaagatccaggcagaactctcgttc
cgggcgcggctgccggcgcacatcgtgccttcgcccggcgcgcttctcgtcacaggcgtc
acgccagcgatgctcgagcaggcaccgctctcggtcggggacatgctcggcctcatcgcc
cgggccttcaacgaatgggccccggcaacgatcgtgacctacaacggtctgcgcttcgac
gaggaggtgttgcggcatgccttcttcacgcacctgctgccgccgtactccagccagggc
cccgggctgaagcgggccgaccttctggtcatgttgcgcgcggttcggttgcttgaacca
aacgctgtgacgatcccgatcggtgtcaacggcaagccgtcgatgaagctcggcgacgtc
tgccgcgcgaacggcatcgccctccacgaggaggatgctcatgacgcgctcgccgacacc
cgcgccaccctggcgctgttccggcatcttcgggaggtggccccgtccaccatcgcgcgg
atgctggagaatacgcacaagtccggacccgcagcgttgctggccggtgacgagcccatc
ctgctcggcggcatgaacgcgatggtgccggtcatcggcatcgcgccgagcccgcgcaac
gccgcagcctgggccgtggccgacctctcggtcgaccctgcaacctatctcgacggctcg
ttggaggagatcgccgcgctgctgaccgccaaaggaccgcgcgcgatccggacggtccgg
accaatgcccagccgatcctcgtcggatgggagcgtggggcgcatgccctgccggctgat
cgccttgatgacgccgtctaccgccagcgcgcgcgacaggtccgtgatcacgcaggcttc
cgcaagaacctgctgcaggcgcttgccaaccaatatgccgatgccgagccgtcgccctgg
ccggaagctacgttgtacagcggtggcttcatcagcgacgagcagatgcgcctgtcccgc
cgttggcgcgaaatcgactgggttgagcgcccggccttcgccgatcagctgttcacggac
gcccggctgcgcgccttctccaatcggctctgcttccttgaggccgccgagcacctctcg
ccggcggcctgggcgaaaagccgggactggctgcgccatcgtctccagaccgaggacgat
gtgccgtggctgacgctgtcgaaagcgctgaaggagatcgacggtcttcgcgctcaaacc
gaagctggcgacgacgaacgcctgcgtcagatcgcggagatcgagcgctggctcgtgggg
cgccagcaggaactcgcgcgggcatccgccgcttag
DBGET
integrated database retrieval system
