Bosea sp. PAMC 26642: AXW83_20545
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Entry
AXW83_20545 CDS
T04264
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bop
Bosea sp. PAMC 26642
Pathway
bop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXW83_20545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bop03019
]
AXW83_20545
03400 DNA repair and recombination proteins [BR:
bop03400
]
AXW83_20545
Enzymes [BR:
bop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXW83_20545
Messenger RNA biogenesis [BR:
bop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXW83_20545
DNA repair and recombination proteins [BR:
bop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXW83_20545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMJ62370
UniProt:
A0A126NZN6
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All DBs
Position
4270282..4272114
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AA seq
610 aa
AA seq
DB search
MPQSRESDARAILKSVFGYDDFRPGQWEVIEAALDGRDVFAVMPTGSGKSMCYQLPALVA
GGLTLVVSPLIALMRDQVGQLTRAGVAAASLNSMNTESEATEAWNRLNAGDLRLLFVSPE
RLAGEGLVSRLRRLGVTRLAIDEAHCVSQWGHDFRPEYRLLAKAREALGGVPVTALTATA
DRQTREDIAQQLFPKLPHSVVHSFDRPNLKLAFAPKDQPRRQIADFLKRHRGGSGIVYCS
SRNRTEKLAQGLSELGYKAYPYHAGMEQTQRNRNQDIFLQEDGVVVCATIAFGMGINKPD
VRFVIHADMPGSIESYYQEIGRAGRDGLPADTLTLYGTEDMALRRRQIDEKAIDDERRKI
EHKRLNAMIDLCESALCRRSALLSYFGEETQTCRHGNAPIRCDLCGSETVLTDATLDARK
LLSAVARSGQRFGAAHLADILTGTMSETIRRQNHDGLKTFGVGKDKAKSAWTALTRKLFA
AGALAEASTEHGGFALTEKGEDILFGREAIALRQDSIAGRRSPAERAAARADGLDEGIAA
LFEHLRQLRLSIAREEGVAAYIIFTDRTLIAMARARPAGLDQMRAIEGVGERKLTQYGEA
FLEAIAGFNG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatcccgcgaatcagacgcccgcgcgatcctcaaatccgtcttcggctatgac
gatttccgccccggacagtgggaggtgatcgaggccgcgctcgatggccgcgacgtcttc
gccgtgatgccgacgggctcgggcaaatcgatgtgctatcagctgccggccctcgtcgcc
ggcggtttgacgctggtggtctcgccgctgatcgcactgatgcgcgatcaggtcgggcaa
ttgacccgggccggtgtcgccgcggcctcgctcaattccatgaacaccgaatccgaggcg
accgaagcctggaacaggctcaacgccggggatctgcgactgctcttcgtctcgccggag
cggctggccggcgaggggttggtctcgcggctgcgccggctcggcgtgacgcggctcgcc
atcgacgaggcccattgcgtctcgcaatggggccatgattttcggcctgaataccgcctg
ctcgccaaggcgcgcgaggcgctgggcggtgtgccggtcacggcgctgaccgcgaccgcc
gaccgtcagacgcgcgaggacatcgcccagcagctctttcctaagctgccgcacagcgtc
gtccattccttcgaccggcccaatctcaagctcgccttcgctccgaaggaccagccgcgc
cgccagatcgcggatttcctgaagcgccatcgcggcggctccggcatcgtctactgctcg
tcgcgcaaccgcacggaaaagctggcgcagggcctgagcgagctgggctacaaggcttat
ccctatcatgccgggatggagcagacgcagcgcaacagaaaccaggacatcttcctgcag
gaggacggcgtcgtcgtctgcgccacgatcgccttcggcatgggcatcaacaagcccgat
gtccgcttcgtcatccatgccgacatgccgggctcgatcgagagctattaccaggagatc
ggtcgtgccggtcgcgacggcctgcccgccgacacgctgacgctctacggcaccgaggac
atggcgctgcggcggcgccagatcgacgagaaggcgatcgacgacgagcgccgcaagatc
gagcacaagcgcctcaacgcgatgatcgacctgtgcgaatccgcgctctgccggcgcagc
gcgctgctctcctatttcggcgaggagacgcaaacctgccgtcacggcaatgcgccgatc
cgctgcgatctctgcggcagcgaaacggtcctgaccgatgcgacgctcgatgcgcgaaag
ctgctctcggcggtggcgcgctcgggccagcgcttcggagcggcccatctcgccgacatc
ctgaccggtacgatgagcgagaccatccggcgccagaaccatgacggactgaagaccttc
ggggtcggcaaggacaaggccaagagcgcctggaccgcgctgacgcgaaaactcttcgcg
gcgggcgctctggccgaggccagcaccgagcatggcggcttcgcgctgacggagaagggc
gaggacatcctgttcggtcgcgaggcgatcgcgctgcgccaggactcgattgcgggccga
cgcagcccggccgagagggccgcagcccgcgccgacgggctcgacgagggcatcgcggcg
ctgttcgagcatctgcgccagctcaggctctcgatcgcccgcgaggagggcgtggcggcc
tatatcatcttcaccgaccggaccctgatcgccatggcccgcgcccggccggcgggcctc
gaccagatgcgtgcgatcgaaggcgtcggcgaacgcaagttgacgcagtatggcgaggcc
tttttggaggcgatcgccgggttcaacggatag
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