Borrelia sp. HM: BKFM_00596
Help
Entry
BKFM_00596 CDS
T08772
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
boq
Borrelia sp. HM
Pathway
boq00260
Glycine, serine and threonine metabolism
boq00630
Glyoxylate and dicarboxylate metabolism
boq00670
One carbon pool by folate
boq00680
Methane metabolism
boq01100
Metabolic pathways
boq01110
Biosynthesis of secondary metabolites
boq01120
Microbial metabolism in diverse environments
boq01200
Carbon metabolism
boq01230
Biosynthesis of amino acids
boq01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
boq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BKFM_00596 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BKFM_00596 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BKFM_00596 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BKFM_00596 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BKFM_00596 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BKFM_00596 (glyA)
Enzymes [BR:
boq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BKFM_00596 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
YfbR-like
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BCR22015
LinkDB
All DBs
Position
628838..630094
Genome browser
AA seq
418 aa
AA seq
DB search
MIIDKILFDLIEKENKRQIENIELIASENFVSLDVRQSVGSILTNKYAEGYPSKRYYGGC
CFVDDIENLAISRAKELFNATYANVQPHSGSQANMAAIMALIKPGDRILGMDLAHGGHLS
HGSKVSFSGILFDSYSYGVSRESEIIDYEDVMRIAKECRPNLIIAGASSYSREVDFKKFR
EIADEVSAYLLCDIAHTAGLVATGFHNSPIDVAHLTTSTTHKTLRGPRGGLILAGKESNI
IVNYNNRERTLENAVNSCVFPGTQGGPLVHVIAGKAVAFREALEDNFKDYISKVIKNSKA
MAEYFISEGFRIVSGGTDNHLFLVDLGIVGITGADAESILENVNITLNKNAIPFDSRSPS
VASGIRIGSAAITSRGLNRDDSIKVASLIVRALKTKSDTELRRIKQEVIEFISCFSMP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgataatagataaaattttatttgacttaattgaaaaagaaaataaaagacagatagaa
aatattgaattgattgcttctgaaaatttcgtatcattagatgtaagacagtctgttggt
agtattttaactaataaatatgctgagggttatccttcaaaaagatactatggaggatgt
tgttttgttgatgatattgagaatttggctatatcacgagcaaaagagctttttaatgca
acttatgctaatgttcaacctcatagtggttctcaagccaatatggctgctataatggca
cttattaagcctggagatagaattcttggaatggatttagctcatggtggccatttaagc
catggtagcaaggttagtttttctggaattttatttgattcatattcttatggagtatca
agagagtctgaaataattgattatgaggatgttatgagaatagctaaggaatgtcgtcct
aatttaataattgctggtgcttcttcttattcaagggaagttgattttaaaaaatttcgt
gagattgctgatgaagtctcagcttatcttttatgtgatattgctcatactgcaggtctt
gttgctacaggttttcataattctcctattgatgttgcacatttgactacaagtactact
cataagactttaaggggacctagaggaggattaattcttgcaggtaaggagtctaatata
atagttaattataataatagggagagaacattggagaatgctgttaattcttgtgttttt
ccaggaactcaaggtggacctttagtgcatgttattgcaggtaaagcggttgcttttaga
gaggctttagaggataattttaaagattatatttctaaggtcataaaaaattctaaggct
atggctgaatattttatatcagagggttttagaatagttagtggtggaaccgataatcat
ttatttttagttgatcttggtattgtgggtattacaggagctgatgctgagagtattctt
gaaaatgtcaatattactcttaataagaatgctattccttttgattctaggagtccttct
gtagcttctggcattcgaattgggtcggctgctattacttcaagaggtttaaatagagat
gattctattaaagttgctagtttgattgttagggctttaaagactaaatctgatactgag
cttagaagaatcaagcaagaagtaatagaatttatcagttgttttagtatgccctaa
DBGET
integrated database retrieval system