Borrelia sp. HM: BKFM_00631
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Entry
BKFM_00631 CDS
T08772
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
boq
Borrelia sp. HM
Pathway
boq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKFM_00631 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boq03400
]
BKFM_00631 (recD)
Enzymes [BR:
boq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BKFM_00631 (recD)
DNA repair and recombination proteins [BR:
boq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKFM_00631 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
PIF1
Helicase_RecD
AAA_22
DEAD
SLFN-g3_helicase
PhoH
SH3_13
RsgA_GTPase
T2SSE
AAA
NPHP3_N
AAA_5
AAA_16
RNA_helicase
AAA_28
DUF3349
Flavi_DEAD
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BCR22042
LinkDB
All DBs
Position
complement(664642..666471)
Genome browser
AA seq
609 aa
AA seq
DB search
MRNYLVLREFLKDHKMNYLGPELKIHEIIETLNINIANYYKAYLLTKNIQNEQSKELAIF
LIFLFNYLSKGHLRANIHLLIKDIQKTIEYTRLELDKENQSYQKSIDILEELAQFTKPTK
MNSMIALLKENNIMANYNQNEKITTPLILENNIHIYTQKNFREEEELIQKIDQRLKDYKS
KISDQRIQDIITKLNTKGLSEEQINSVKKSLKSNFFILSGGPGTGKTTTINYILKAIDIH
LNIKQKVALIAPTGKASQKLKSSLKESFKNIETEHSTIQKLLKISFISKVNKYDEANFLD
FEIIIIDEASMIDASTFLKLLKAIKINTKLIITGDKNQLPSIAGGNVYASLMKIKDISDE
NVEILKKNFRSNDEINLLAKAIYKEDTNLIDLQLNANKNIILKDIDKVNIEHELLNYRKN
LYKDISNFDLNSLKDQEVESIINTLLNNTILCSKNFGRFGTKKINEIIKLDLKKVYGDLI
GQIILITQNDYKNNLFNGERGIIFRENSKIYALFKKEDEKYTKINLNLLDKYEISFATTI
HKSQGSEYQHVQIILEDHPFLTKELLYTAITRAKESIEIISSKNIIKNVSLKKVERDSKI
LDYINALSH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattatttagtgttaagggaatttttaaaagatcataaaatgaattatttaggt
ccagaacttaaaatccatgaaataattgaaactttaaacataaacatagcaaactactac
aaagcatacttacttacaaaaaacatacaaaatgaacagtcgaaagaacttgctattttt
ttaatatttttatttaattatctttctaaaggacatttaagagccaacattcatctacta
ataaaagatattcaaaaaacaattgaatatactcgcttggaattagacaaagaaaatcaa
tcttatcaaaaatcaatagatatactagaagaacttgcacaatttacaaaaccaacaaaa
atgaattccatgatcgcacttttaaaagaaaataatatcatggcaaattacaatcaaaat
gaaaaaatcacaactcctttaatattagaaaataatatacatatctatacccaaaaaaat
ttcagagaagaagaagaactaatacaaaaaatagatcaaagacttaaagactataaaagt
aaaataagtgatcaaagaatacaagatattataaccaaattaaacaccaaaggactaagt
gaagaacagattaattcagtcaaaaaatctctcaaaagtaacttttttatactaagtgga
ggccctggaacaggaaaaacaacaactatcaattatattttaaaggcaatagatattcac
ttgaacattaagcaaaaagtagctcttatagccccaacaggaaaagcaagtcaaaaatta
aagtcaagtttaaaggaatcatttaaaaatattgaaacagaacatagtacaatacaaaaa
ttactaaaaatctcatttattagcaaagtcaacaaatacgatgaagccaattttctagat
tttgaaataataataattgatgaagcatctatgatagatgcaagtacttttttaaaattg
ttaaaggcaatcaaaataaacacaaaacttatcataacaggagataagaatcaacttcct
tcaatagctggaggaaatgtatatgcaagccttatgaaaataaaagatataagtgatgaa
aatgtagaaatacttaaaaaaaattttagaagtaacgatgagataaatttattagcaaaa
gcaatctataaagaagatacgaatttaattgatcttcaacttaatgctaacaaaaatata
attttaaaagatatagataaagtaaatattgaacacgaactattaaactacagaaaaaac
ttatataaagatatatctaacttcgatcttaattcattaaaagatcaagaagtcgaatca
ataataaatactctacttaataatacaattttatgttcaaaaaattttggaagatttgga
acaaaaaaaattaatgaaataataaaattggatttaaaaaaagtatatggcgatttaatt
ggacaaataattttaattactcaaaatgactataagaataatctatttaatggagaaaga
ggtattatttttagagaaaattctaaaatttatgctctatttaaaaaagaggacgaaaaa
tatacaaaaataaatcttaatttacttgataaatatgaaattagttttgcaacaacaata
cataaaagccaaggttctgaatatcagcatgtacaaataatactagaagaccatccgttc
ttaacaaaagaactactctatactgcaataacaagagctaaagaaagtatagaaataata
tcaagcaaaaatattattaaaaatgttagtctaaaaaaagtagaaagagattcaaagatt
ttagattacataaatgcattgagtcattaa
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