Borrelia sp. HM: BKFM_00773
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Entry
BKFM_00773 CDS
T08772
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
boq
Borrelia sp. HM
Brite
KEGG Orthology (KO) [BR:
boq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boq03021
]
BKFM_00773 (rpoD)
Transcription machinery [BR:
boq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKFM_00773 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_10
GerE
HTH_28
HTH_23
DnaD_N
Phage_terminase
HTH_25
KORA
Sigma70_r4_2
HTH_11
Formin_GBD_N
Fe_dep_repress
V-SNARE_C
ENT
Motif
Other DBs
NCBI-ProteinID:
BCR22178
LinkDB
All DBs
Position
complement(818107..818910)
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AA seq
267 aa
AA seq
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MNIFSNEDLNIYLKSVRGHRLITHEEEIELANQIKRGDIKAKNKMINANLRLVLKIIKRY
AGKGLKVEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFWIKQSLQRALNTKTRLVKVPY
RKENLILQINKYLMEEEKSPKKEDIMEKFNLTTSQYIKIIPYLEKEYSLDKKIEGSENST
LLNLYEDNSFNPESTLEQNSTLKHLNHILETKLNDKERYIIRKRYNLDNEDKKSTLKDIS
SELGISSETVRQIEKRVLKKLRDELYQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatatttagtaatgaagatttaaacatatacctaaaatcagtaagaggacacaga
ttgataactcacgaagaagaaattgagctagcaaaccaaataaaacgtggggatataaaa
gcaaaaaataaaatgataaatgccaatttacgtcttgtactgaaaatcattaaaagatat
gctggcaaaggattaaaagttgaagacctaatacaagaaggaaatttaggtttaattaga
gctgcagaaaaatatgacccaagcaaaaatactaaattttcaacctatgcttcattctgg
attaagcaatcacttcaaagagcattaaatactaaaacaagacttgtaaaggttccttac
agaaaagaaaatttaatactccaaataaacaaatatcttatggaagaagaaaaatctcct
aaaaaagaagacataatggaaaagtttaacttaacaacttctcaatatataaaaatcatt
ccttatctggaaaaagaatattcccttgataaaaagattgaaggttcagaaaattccaca
ctcttaaatctttatgaagataattcttttaatccagaaagtactcttgaacaaaattca
acactaaaacatctcaatcatatattagagaccaaactaaacgataaagagagatatatt
ataagaaagcgatataacttagataatgaagataaaaaaagcacattaaaagatatttct
agtgagcttggcatttcctcagaaaccgtcagacaaattgaaaaacgggtactaaaaaaa
ctaagagatgaactttatcaataa
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