Borrelia sp. HM: BKFM_00810
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Entry
BKFM_00810 CDS
T08772
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
boq
Borrelia sp. HM
Pathway
boq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKFM_00810 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boq03019
]
BKFM_00810 (pnp)
03016 Transfer RNA biogenesis [BR:
boq03016
]
BKFM_00810 (pnp)
Enzymes [BR:
boq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BKFM_00810 (pnp)
Messenger RNA biogenesis [BR:
boq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BKFM_00810 (pnp)
Transfer RNA biogenesis [BR:
boq03016
]
Prokaryotic type
tRNA degradation factors
BKFM_00810 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
DUF3016
S1_RRP5
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BCR22214
LinkDB
All DBs
Position
855928..858084
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AA seq
718 aa
AA seq
DB search
MKKVLKLKIGREDLILETGLLAKQANGAVLATYGGSTVLATVCCSDLVREDLDFVPLSVE
YNEKYYAAGKIPGGFIKREGKPKDKEVLVSRLIDRPMRPLFDKRFGREIQVVPTTLSTDQ
MNPPDIVGMNAAFASVFLSDIPFNGPIAAVRIAYLNNEFIVNPSFSEIEDSMLDIVVAGS
LDGITMVEGGANEVSEEILLSAIDQAYEYIKQICNLQKEFMSIMQNKEKLPLAYEERVFE
FKDELKSLIYSELRDACFVKGKLNRDRAIKLVKTKAYEHFSSLNQVNEENEFLFYKAFDG
FEQEIVRKSILEDNLRTDGRTPTQIRNIVAEIDLLKRTHGSALFTRGETQALAVTTLGTS
IDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRSLEAMLPKKDN
FPYTIRVVSEVLESNGSSSMATVCSGSMSLMAAGVPVKEQVAGIAMGLVSEGDKYVVLSD
ILGEEDHLGDMDFKVAGTKNGITGFQMDIKISNVTRHLMKEALEQARIGRMHILSIMDSV
ISRSRYDISVNAPKIIQLQIDIDKISLVIGSTGKTVKAITDEFEVRVQIEQDGRINLFGT
DSLKMQKAKERIESIVREPKVGEIYEGIVKKINSFGAFVELTPIKEGFLSNRAKLKDDRY
SDVRNSRYGNNRYSRYGSRDNKTTFGIRPPRLEEGQKIKVRISDIDKFGKIELEFVRD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagttttaaagttgaaaataggaagggaagacttgattttagagacgggttta
ttggccaaacaagcaaatggcgcagttcttgctacttatggtggttctactgttcttgct
acggtttgttgttcagatttagttcgtgaagatttagattttgtccctttatcagttgaa
tataatgagaagtattatgctgctgggaaaattcctggagggtttattaagagagaaggt
aaaccaaaagataaagaagtacttgtttctaggttaatagatagacccatgagacccctt
tttgataagagatttggtagggaaattcaggttgtgcctactactttatctacggatcag
atgaatcctcctgatattgttgggatgaatgctgcttttgcatcagtttttttatcagat
ataccttttaatggtccaattgcggctgttagaatagcttacttaaataatgaatttata
gtaaatccttcttttagtgaaattgaagattctatgcttgatattgttgttgctgggagt
ttggacgggattacaatggttgaaggtggtgctaatgaagttagcgaagaaattttactg
tccgctatagatcaagcttatgaatatattaaacaaatttgtaatctccaaaaggaattt
atgtctataatgcagaataaagaaaaattaccacttgcttatgaggaaagagtatttgaa
tttaaggatgaacttaagagtttaatttattctgaacttagagatgcttgctttgttaag
ggtaagcttaatcgagatcgagctataaagttagttaaaactaaggcctatgaacatttt
tcttctctcaatcaagtaaatgaagagaatgagtttcttttttataaggcttttgatgga
tttgagcaagaaattgttagaaaatcaatacttgaagataatcttagaactgatggacgt
actcctacacaaataagaaatattgttgctgaaattgatctcttaaagcgaacccatggt
tctgctctttttacaagaggtgaaactcaagcattagctgtaactactttgggtacaagc
attgatgaacagataatggatgatattgatggcgataagcgtcttaattttatgcttcat
tataattttcctccattttctgttggagagacaggtaggctgatgactggaagacgtgaa
attggacatgggcatttggctcagaggtctttagaagctatgttacctaaaaaagataat
ttcccatatactattagggtagtatctgaagttttagagtccaatggttcatcttccatg
gccacagtatgttctgggagtatgtctttaatggcagcgggggttcctgttaaggagcaa
gttgcaggaatagcaatgggacttgttagtgagggtgataagtatgttgttttaagtgat
attcttggagaagaggatcatttaggggatatggactttaaggtagcaggaactaagaat
ggaattactggttttcagatggatattaagatttcaaatgttacaaggcatttaatgaag
gaagctcttgaacaggcacgaattgggagaatgcatattctctctattatggattctgta
atttcaagatcaaggtatgatatatctgttaatgctccaaaaattattcaattacaaatt
gatattgataaaatttcgcttgttattggctctactggtaaaacagttaaagcaattaca
gatgaatttgaagttagagtgcaaattgagcaagatggaagaattaatctttttggaact
gatagcttaaaaatgcaaaaagctaaagaaaggatagagagtattgttagagaacctaag
gttggtgaaatttatgaaggaattgttaaaaagattaacagttttggagctttcgttgag
cttactcctataaaagaaggatttttgagtaatcgagcaaaattaaaagatgatagatac
agtgatgttagaaattctaggtatggcaataatagatattctagatatggtagtagagat
aataaaactacatttggtattcgtcctccaagattagaagaaggacaaaaaataaaggtt
agaatatctgatatcgataagtttggtaagattgagcttgaatttgttagagattaa
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