Borrelia sp. HM: BKFM_00831
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Entry
BKFM_00831 CDS
T08772
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase
Organism
boq
Borrelia sp. HM
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Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
WHD_HA2
AAA_22
ResIII
AAA_19
nSTAND_NTPase5
NAT10_TcmA_helicase
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BCR22235
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Position
complement(878772..881261)
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AA seq
829 aa
AA seq
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MSDFELPIYKYKDELIKNLETNNVLIVESPTGSGKTTQIPRIIYEAGLAKIGKIGVTQPR
RIATVSIAEYIAKHIGVKLGEEVGYKIRFREVISSKTKIKLMTDGVLLQELKKDTLLYEY
DVIIIDEAHERSLNIDFILGLIKDILNKRNDFKIIISSATINTQVFSKYFNNAPILNIET
ITYPVQIIYNPPSFNTSKAMILKIKEIISGILKEGKEGDILIFLSGEKEIKETIKEIHEL
NSKQNLVILPLYGRMAKEAQEEIFRPTPKNKRKIIVSTNIAETSITIENIKIVIDSGKVK
TNRFQMKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYKRDEYNLRDEYQKEEIYR
TDLSEVILRMADIGIRNFTKFDFISKPSIKSIQTASDILKSLDAINEKNELTEIGKYMII
FPLIPIHSRALVEAMINYQQAIYPTTIGLSFLSTSGIFLLPQNEEIEARQAHIKYKNPLG
DLIGFINIFEDYKKAINKEIFAKENYLDLQGLEEIANVQRQLENIVSSFNIPIVNKHEID
HEGYLKSIMRGMKDYICFKTSKNKYKTIKAQNVVIHPGSLINTDSVKYFVAGEIIETTKR
YARSIGVLKKEWINGIQFEKNENKYAKKEKKNLNNNTYHTIEKKDQNLVSKNEITIGKKK
FNIKNENKNQLTLSLKEVQELISRTIKNEEEKSLRNTFAKLTYENLTIFKNKKLIEIMRI
VNGMELDWKLLEKYENTNVNISEIDKMKNILECTMNFIKHPNKKSVLFLSLRSDYSDNFW
LKPQKSFIIAIEESMDSIKSLIDTQDNIKKLTSIKKTINKVYQKLNFFF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgagcttcctatttataaatataaagatgaactaattaaaaatttagaa
acaaataacgttttaatagtagaaagtccaacaggaagtgggaaaacaacacaaatacca
agaataatatatgaagccgggcttgcaaaaattggtaaaattggtgtaactcaaccaaga
agaatagccactgtatcaatagcagaatatattgcaaaacatattggtgtcaaacttgga
gaagaggtaggctataagataagatttagagaagttataagctctaaaactaaaattaaa
ttaatgactgatggggttttattacaagaactcaagaaagataccctactttatgaatat
gatgtaatcataatagatgaagctcatgaaagaagtttaaacatagatttcatactagga
cttattaaagacatattaaataaaagaaatgattttaaaattattatttcatctgccaca
ataaatacacaagtattttcaaaatactttaataacgcaccaatacttaacatagaaaca
attacttatcctgtacaaatcatatacaatccaccatcatttaatacatcaaaagcaatg
atattaaaaataaaagagataattagtggtattcttaaagagggaaaagaaggtgatatt
cttatatttctatcaggagaaaaagaaatcaaagaaacaataaaagaaattcatgaattg
aattcaaaacaaaacttagtaatattacctttatatggccgaatggcaaaagaagcacaa
gaggaaatattcaggcctacaccaaagaataaaagaaaaataatagtatctacaaatatc
gcagaaacatcaattacaattgaaaatattaagatagtaattgatagcggaaaagtcaaa
acaaacaggtttcaaatgaaaacacatacttactctcttcaagaagtaccaatttcaaaa
tcatctgctacacaacgagcaggaagagcaggaagactttcaaaaggaacatgttacagg
ttgtacaaaagagacgaatataatttaagagacgaatatcaaaaggaagaaatatataga
acagatctctctgaagtaatattaagaatggccgatattggaattagaaattttacaaaa
tttgactttatttcaaaaccatcaattaaatccatccaaacagcaagtgatatattaaaa
tctctagacgcaataaacgaaaaaaacgagcttacagaaattggaaaatatatgataata
tttcctttaataccaatacattcaagagcattagtcgaggcaatgataaactatcaacag
gcaatatatccaaccacaattggactatcatttctatccacaagcgggatttttttgttg
cctcaaaatgaagaaattgaggctagacaagctcatataaaatataaaaatccactagga
gatttaataggatttatcaacatatttgaagactataaaaaagctattaacaaagaaata
tttgctaaagaaaattacttggacttacaaggtcttgaggaaattgccaatgtacaaaga
caacttgaaaacattgtaagtagctttaatatcccaatagtaaacaaacatgaaattgat
catgaaggctaccttaaatccataatgagaggaatgaaagattatatttgctttaaaact
tcaaaaaataaatataaaaccataaaagcacaaaatgtagtaatacatcctggatcactt
attaatacagactctgtaaaatattttgtggccggagaaataatagagacaaccaaaaga
tatgctagatcaattggggtacttaaaaaagaatggatcaacggtattcaatttgaaaaa
aatgaaaataaatatgctaaaaaagagaaaaaaaatctaaataataatacttatcacact
atagaaaaaaaagatcaaaatcttgtatcaaaaaatgaaataactattggaaagaaaaaa
ttcaatattaaaaatgaaaataaaaatcaattaacactgagtttaaaggaagtacaagaa
ctaatttcaagaacaataaaaaatgaagaagaaaaatcattaaggaatacctttgcaaaa
ttaacatatgaaaacttaacaatatttaaaaataaaaaattaatagaaataatgcgtata
gtaaatggtatggaattggattggaaactactagaaaaatatgaaaacacaaatgtcaat
atcagtgaaattgataaaatgaaaaatattttagaatgcaccatgaattttattaaacat
ccaaataaaaagtcagtcctttttctatcacttagaagtgactattctgacaatttctgg
ctcaagcctcaaaaaagttttattatagcaatagaagaatcaatggatagcataaaaagt
ttaatcgacactcaagataatattaaaaaattaacatctattaaaaaaacaataaataaa
gtttatcaaaaattaaacttttttttctaa
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