Bipolaris oryzae: COCMIDRAFT_100193
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Entry
COCMIDRAFT_100193 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_100193
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
COCMIDRAFT_100193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
19117628
NCBI-ProteinID:
XP_007689821
JGI:
Cocmi1_100193
UniProt:
W6Z1X0
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MAAPYDSDSSDGGDDYTETNVLLGYAAKEVTSDTISHLGGTPSWIDDKTAPSGALAKCKV
CNGLLSLLLELNGDMPDTFPGHERRLYIWTCRRKTCRRKEGSVRGIRGVRVAKGATNKIP
AAKIEKKEEKLEEKPQPRIGESLFGVQNGAGASASANPFSNPFSSKPGTGAANPFSSQSG
SANPFGAPASAPAVQAIASEKNRDEASTTLPETFASKARISSPPPAEQQPPRPHEPWPAD
SAFPTPFPHYHLDAEYETLDIPSAPTIPANVRMEVDGEGSGGTGGGKEDKEVFESSMDRT
FQKFADRVGENAEQVLRYEFKGKPLLYSDSDAVGKALAAHSENGPSSNAKVITTGSKGGS
GFPRCQTCGADRVFEVQLTPHAIAELEAEEMTLDGMEWGTIIMAVCSKDCKPNDVPEGEL
GYVEEWVGVQWEEVSSKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccatatgacagtgattcgtccgatggcggtgatgactacaccgagaccaat
gttctcctcgggtatgccgccaaggaggtcacgagcgacacaatctctcatcttggaggc
actccgagttggatcgatgacaagactgcgccttcaggcgccctagccaagtgtaaagtc
tgtaacggtctcctcagtcttttgcttgagctcaacggcgacatgcccgataccttccct
ggccacgagcggcgattatacatctggacgtgccggcgcaagacatgcagaagaaaagag
ggcagtgtgaggggcatccgtggcgtgcgcgtcgcaaagggcgccaccaacaagatcccc
gctgccaaaatcgagaagaaagaggaaaagctggaagagaagccacagcccaggataggc
gagtcgctctttggtgtgcaaaatggggcaggcgcttcagcatctgcaaatcctttctcc
aaccctttctcttccaagccgggtactggagcagcaaaccccttctcttcgcagtcagga
agcgcgaacccctttggcgccccggcgtcggcaccggctgtacaagccatcgcatccgag
aagaacagggatgaggcgtccacaaccctcccagagacctttgcatccaaagcgcgcatc
tcatctccacctcctgctgaacaacagcctccacggccacacgagccctggccagcagac
tctgccttccccacaccgttcccacactaccacctggatgccgagtacgagacactagac
attccatcagcgccaacaatcccggcaaatgtgcgcatggaggtagatggcgaaggtagc
ggtggcactggaggaggtaaagaagacaaggaggtctttgaatcatccatggacaggaca
ttccagaagttcgcagaccgcgtgggcgagaatgcagagcaggtcttacgttatgagttc
aagggcaagccattgctgtacagcgatagcgacgctgttggaaaagctctggcagctcac
tcagagaatggaccgtcctccaatgccaaagtcatcacaacgggctcaaagggcggatcg
ggtttccctcgctgccagacgtgcggtgcagacagagtatttgaggttcagctgacaccg
catgccattgctgagctggaggctgaagaaatgactctcgacggtatggaatggggcact
ataatcatggctgtctgcagtaaggactgcaaacccaacgacgtcccagaaggcgaattg
ggatatgtagaagaatgggttggtgtacagtgggaggaggtctcttcgaagaagtag
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