Bipolaris oryzae: COCMIDRAFT_100257
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Entry
COCMIDRAFT_100257 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_100257
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
COCMIDRAFT_100257
TFIIIC, fungi type
COCMIDRAFT_100257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_8
TPR_11
TPR_2
ARM_TT21_2nd
HTH_16
Alkyl_sulf_dimr
TPR_17
ChAPs
Motif
Other DBs
NCBI-GeneID:
19117636
NCBI-ProteinID:
XP_007689812
JGI:
Cocmi1_100257
UniProt:
W6YWD3
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MQPAAQHGRQQYPVQFPQNGLPFPSHSVYHQPDFQPSQFHHQPPTRNPYIPLIPLDAVED
LEEDESLPPFTSGNFQDPFNRAYTTSGPAVFEGFIPANPEQEDEDEYTEASEFHSSIYDR
GFESTEEEEEEDDDDEDDEYERMIEEEEERERLLQTQKDDSEVDADYSSEDAQQDEGDPE
DMELGVEFEDMEGRASGARSTRGRRRGKPGREKGPRGPRAVADPGAEWKALQQQANAKFI
EKDYEAALSFAQQAIQLNPEIFDAYNIASEIYTEMGREEDSIAVLLAGAPTKRDPGLWQF
IIERIQQLDPEQHPRFTDENKSAAILPCLNEIILLNNDYEARSHKLEIEAQLGRSSKCVM
LGLKMLKTRKEQGEDPDTSVLKIMAMMGTASPRQTKIHLHKLTDSFEEAIDAFTQPGRDP
VTNDLDWELINIYLDLLDRAGSYATGVTKLKSLSRWKQGRHAETFWDEIDDDREFDIEDE
PRRVAVPQFVRKSQDAKYGSTLPLEIRVKLGLFRLRRSKDDFKEAMHHLEMLEPDDQGPD
ALMWDYEDLFRIIGDALHATGHDKDALRFYEPLFSNDSREFNLMSYIGLHTCFKNEGRTE
KAAEVIPILKKWPAKSYDDLAILAKFFEDQGMWQEAGQRAETIYRDKYGHKLKALGFQAY
DELRVYYYNQRRQARGRYAVRKSTVRRNRKKMQKATGQNDEEDDSANETGNKELPGIIAP
TERPKKGLFRTKRTKAPKIQVFLDVREEDAELAPDVDPRPATIEGTDVPYRAITNRLFRG
KLQKLATDFANDLKAARAQHREIVSSFKRLDEIWGPAEDGDEEAIKEVLSITRELIEEFS
TFDLFYSNKKEDLMTYFRRVTAGDLWKESALMVLAVVANNVEDGETNPELQERPSTPPTD
FWGVHFDKWCDAFGRYAILLAGEGDEEQCFATLDIALQANIFHRSQVYHRQLQICRLTCA
LAADNSPQASVAARWLLKEYPFGTDLFRLYSAVNRLCSFPEGFATGPAYKVLMRYIKTVD
YALLTPEQRIEFNFSTKATKGGFRNNANIEDVDKVQGHDPALFALYAHVLMCGGSYMAAL
NYYFRAFALTPEDPVINLGIGVAYIQHAMKRLSENRQYQIQQGLSFVYRYYDLRIKSPYA
IHRQEAEFNVGRMWHSLGLVALALPAYERCIALSEQVKKEAQDQCIDENWGCEDFSTDAA
FAMQSIYAISGNFEGALEVTMKSLVIE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagctgcgcagcatggcagacagcaatatcctgttcagttcccacaaaatggg
ctgccgtttccttcccactcagtgtaccaccaacctgactttcagccttctcaattccac
catcaaccgccgacccgaaatccgtacatacctttaattccactagacgccgtagaagat
ttagaagaagacgagtctttgccaccttttaccagtggaaattttcaagatccatttaat
agggcttacactactagtggaccggcggtctttgaagggttcatcccagcgaaccctgaa
caagaggatgaagatgagtataccgaagctagtgaatttcactcttcgatttatgatcgc
gggtttgagagcacagaagaagaggaagaagaagatgacgacgacgaagatgacgagtat
gaacgtatgattgaagaagaggaagagcgagaacggctactgcaaactcagaaagacgat
tctgaagttgacgcagactactcgtccgaagatgcacagcaagatgaaggtgatcccgag
gacatggagctgggtgttgaattcgaggacatggaagggcgtgccagtggtgctcgttct
acacggggtagaaggcgagggaaacccggaagagagaaaggtcctcgaggtccccgtgct
gtagccgacccgggcgcagaatggaaagccttgcagcaacaggccaacgccaaattcatc
gagaaggactatgaggcagccctttcgtttgctcagcaggctatccaactcaaccccgag
atttttgatgcctacaacatcgcctctgagatttacactgaaatgggccgtgaagaggat
tccatagctgtactgttagctggcgcgccaacaaagcgtgaccctggtctttggcagttt
atcatcgagcgcatccaacagttagacccggagcaacacccacgtttcactgatgagaac
aagtcagctgctatacttccatgcttgaatgagatcatcctgctcaacaacgactatgag
gctcgtagccacaagctcgaaattgaggcacaactaggacgttcttcaaagtgcgtgatg
ctgggcctcaagatgctcaagacacgtaaagagcagggagaagatccggacaccagtgtg
ctgaagatcatggcaatgatgggcactgcatcgccaaggcagaccaaaatacatctccac
aaacttactgacagctttgaggaggctattgatgcgttcacgcaacccggccgggaccca
gtcacgaatgatctcgactgggagttgatcaatatctatcttgatctgttggaccgagca
ggtagttacgctacgggagttacgaagttgaaatcactttcgcgatggaaacaaggcaga
catgccgagacgttttgggatgaaattgacgacgaccgcgagtttgatattgaagatgag
ccaagacgtgtcgctgttccacagtttgtgcggaagtcccaagatgccaagtatggctca
actcttccactagagatcagggtcaaacttgggttgttccggctacgtagaagtaaagat
gacttcaaggaagctatgcatcatctggaaatgttggaaccagacgatcaaggtccagat
gctcttatgtgggactatgaagatctctttcgaattatcggcgatgccttacacgctact
ggtcacgacaaggatgcgctacgtttctatgagccattgttcagcaatgactctagagag
ttcaatctcatgagctacattggcttgcacacttgcttcaagaatgaagggcggacggaa
aaggcggcagaagttattcccattttaaagaaatggccagcgaaaagctacgatgacctc
gctattcttgcaaaattcttcgaagaccagggcatgtggcaagaagctggacagcgcgca
gagaccatttaccgcgataagtatggtcacaaactcaaggctctgggcttccaggcctac
gacgagctcagagtatactattacaaccaacgtagacaggctcggggcaggtatgctgtc
cgaaaaagcactgtacgaaggaaccgaaagaagatgcaaaaggcgactgggcagaatgac
gaagaggatgattcggcgaacgaaacaggaaacaaggagctcccaggaatcatcgcccct
actgaacgacccaagaaaggtctattccgaacaaagaggaccaaggctccaaagatccag
gtattccttgatgtacgcgaagaagacgctgaactagcgcccgacgtcgatcccaggcca
gctacgattgagggcactgatgtgccgtatcgggcaattacaaatagactgttccgcggt
aaacttcaaaagcttgctacagactttgccaatgatctaaaggctgcaagagctcaacat
cgagaaattgtctccagtttcaaacgactggatgagatttgggggccagcagaagatgga
gacgaagaagctatcaaagaggtcttatctatcactcgagagttgattgaagaattttcg
acatttgacttgttttattcgaacaaaaaagaagacctcatgacttacttccgacgcgta
acagccggagacctttggaaagaatctgcactgatggtacttgctgttgtagcgaacaac
gtcgaagacggcgagacaaaccctgaactccaagaacggcccagtacacctccgactgat
ttctggggtgtccatttcgataaatggtgtgatgcatttggccgttatgccattctgctc
gctggtgagggtgatgaagagcaatgttttgctacactcgatattgccctccaggccaat
atctttcaccgctcccaggtctaccatcggcaactccaaatatgtcgactcacctgtgcc
cttgcagccgacaactcaccgcaagcctctgttgcagcacgttggcttcttaaagaatac
ccgtttggtactgacctcttccgtctgtacagcgccgtcaatcgtctatgctcttttccc
gaaggctttgcaactggtcccgcatacaaagtactcatgcgctacataaagacggttgat
tatgcactgcttaccccggaacaacgcattgaatttaacttcagcactaaagctaccaaa
ggcggtttcagaaataacgccaacatcgaagatgtggataaagtccagggccacgacccc
gcgctctttgcgttatacgcacacgttctaatgtgcggcggaagctacatggcggcacta
aactactacttccgtgcattcgctcttacgcctgaagatccagtaatcaatctgggcata
ggcgtagcatatatccaacacgccatgaaacgcctctcagaaaacaggcagtaccaaatc
cagcaaggtctgtcctttgtctacagatattacgatctccgcatcaaaagcccatatgcc
attcatcgtcaggaagcagagttcaacgttggccgcatgtggcacagtttgggtcttgtt
gcgctggcgctccctgcatatgaaagatgtattgcgcttagcgagcaggtgaagaaggaa
gcacaggaccaatgtatagatgaaaattgggggtgtgaagacttcagcaccgacgccgca
tttgctatgcagagtatctatgccatcagtggaaatttcgagggcgcgttggaggttacg
atgaagtcgctagtcattgagtag
DBGET
integrated database retrieval system
