Bipolaris oryzae: COCMIDRAFT_10030
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Entry
COCMIDRAFT_10030 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bor03029
]
COCMIDRAFT_10030
Enzymes [BR:
bor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCMIDRAFT_10030
Mitochondrial biogenesis [BR:
bor03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
COCMIDRAFT_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
19117646
NCBI-ProteinID:
XP_007693477
JGI:
Cocmi1_10030
UniProt:
W6YQU6
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MLTRAAGRKLRRDAFRTPTTLSDQLTLPWLCPALSRAHSQTPSMAARRSAHDSTTRRRQR
RSSLSTPLSSSISATLPTAVRHDARSLATTAELQPPPPSSLSFNPFTQAFGRHPPHADLA
RLPLWDVTDPLVVHDSLASMPQLRAVPGVGSDPTELHQNLYACLRVGRVDRAAVIIKRLM
TLYRPDAPEVIDAHNVYLQTLLDLGQYDAKASAMEKVQTWYKTKMLLQGVKPSAQTFVTL
IRSAMHFLDDSAAEDAVRAYIATAREYGEHVVDSINASPDFSDEEWDLLIRLQPESFNEP
PSVEQVQHLHVSTPAGRTNLIAHGLIPHPAQQIKPVKQKGMGLDSLKQALNVFDHGDCVP
YPHDMEGTQEEKDQAYAYARQIQMEQDGMEAAVKRWKAEDEKMQEIGIHGVMNKKSIQAM
MYGWYTALVPLFKKRIEHAKQVLLEPPKATTRDDAHEYGVWLERCKPEKLAAITVARTTQ
SSVKGKGEDSSALKIASLSIAVGNDIEDYLNAEAQTRRDTFLKKQRKQTRLNLVSTLAKS
DSASSTEKEIQSAKTSMFEFERVNMPISARTKLGAMCIEQLLQSATLVVTAKDPRTGKSV
SRSMAAFHHQVGFHQGKKLGFLVPHHELMAKMRTDSVHSIQTVRLPMVVEPKPWSSFEDG
GYYTVPQKIVRQKGGDSAQRAYAQLAIENGDMSKIMAGLDVLGKVPWQINAPVFDVMARA
WNAGESIGSLVGEDAITSLKRPSEPSAEASFQERSRWNKALQEYEDTIGGLHSQRCFQNF
QLETARAYANEKKIYFPHSVDFRGRAYPIPPILNHIGSDLSRGLLKFAHGKELGAVGLQW
LKIHLANLYGFDKASLREREQFAMDHMSEICDSASQPLEGQRWWTKAEDPWQCLACCIEL
KNAFDLPDPTRYVSQLPVHQDGTCNGLQHYAALGGDHAGARQVNLEPSDRPQDIYTGVAE
LVKEMVAKDASKGLPVANFIDGYISRKVVKRTVMTNVYGVTFMGAKQQVQDELRNLFPHF
QPTDKVKSLGVVALYVAQRIFEALGKIFNGAQEIQYWLGECGDRITTSISAEQIKRIQER
FEGTDPAVALYDPKFAAPKKVTTLQINKLNKNMEKFKTSIIWTSPLKMPIVQPYRKDTVQ
KIRTKIQDITVSKKSQQDEVDKRKQLQAFPPNFIHSLDATHMTLSALKANEMGLDFAAVH
DSFWTHASDIPNLNIILRDAFVRMHSEDIIARLAAEFSARYAGAMYRATVVNNSEVGRKI
IKWRMENRRTGGKATKVSGLARADATFEEIALEAKRQELLKSGDPKQRKEGEEMETPTSI
WLANQDPKALHSFRLQLLGETKENESAERQTEIRDDVLDGIAEPCITTESTMHLVEDGAE
DLGKDPESGGLHGKKKSPSRIAADKSTIQVWVPLEFPQIPKKGGWDVSRLRESKYFFS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgcgggcagccggacgcaaactgcgcagagatgcctttaggacgcccacaact
ctctccgaccaactgacgctgccatggctgtgtcccgccctgtcacgagcgcattcacag
acgccttcgatggctgcacgacgcagcgcacacgactcgacaacacgacgtcgacaacgt
cgctcgtcactatccacccccctctcttcttcaatctctgctaccctccctacggccgta
cgtcatgacgcacgctcactcgctacgacggccgaattgcagcccccgccgccctcgtcg
ctttccttcaatcctttcacccaagcctttggccgtcatccacctcacgcagacctcgcc
cgcctaccgctatgggatgttaccgacccactggtcgttcacgattcactggcctcgatg
ccacaacttcgagccgttcctggtgtcgggagcgatcctaccgagctacatcaaaaccta
tatgcctgtctacgggtcggtcgtgtggatcgtgccgctgtaattatcaagcgactcatg
actctataccgaccagatgcacccgaagtgattgacgcgcacaatgtctacctccaaacc
cttttggacttgggccaatacgatgccaaagcctcggcaatggaaaaggtacagacttgg
tacaaaaccaagatgctgctccaaggcgttaaacccagtgcgcagacatttgtcactctc
atacgttccgcaatgcacttcctcgacgacagcgccgcagaagatgccgtccgggcatac
attgctactgcgcgcgagtatggcgagcacgttgttgacagcattaatgcttcacccgac
ttttccgacgaagagtgggatcttttgattcgtctacagcccgagtcattcaacgagcct
ccgtcggttgagcaagttcaacatctccatgtcagcacacccgccggccgcaccaatctt
atcgcccatggcctaataccacatccagcacagcaaatcaagcctgtcaagcagaagggc
atgggtctggactcgctgaaacaggcactcaatgtctttgatcatggagactgtgtcccc
tacccacacgacatggagggtacgcaagaggagaaggatcaagcatacgcctacgcacga
cagattcagatggagcaggatggaatggaagccgctgtcaagagatggaaagccgaggat
gagaaaatgcaggaaattggcatccatggcgtcatgaacaagaagtctattcaagccatg
atgtatggttggtacaccgccctagtaccattgttcaagaagcgcattgagcatgccaag
caagttttgctggaacctccaaaggccacaacgcgggacgacgcccatgaatacggtgtt
tggctagagcgatgcaaacctgagaaactagcggctatcaccgttgcccgtaccactcaa
tcttcggtaaaaggcaaaggagaagacagttctgctctcaagatagcgtccctgtccatc
gctgtaggtaacgacattgaggactatctcaatgccgaagcccaaactcgccgagacact
tttctcaaaaagcagcgtaaacaaacccgtctgaacttggtcagcacgcttgccaaatca
gattcggcatcatccacagaaaaagaaatccaaagtgcgaagactagcatgtttgagttt
gagagggttaacatgcccatctcggctcggacgaagcttggtgctatgtgcatcgaacag
ctacttcagtcagcaactcttgtggtgacggcgaaagatccgagaaccggcaaatcagtc
tcacgtagcatggctgcttttcaccaccaggttggatttcatcaaggcaaaaagcttggt
ttcctggtgccacaccacgagctcatggccaagatgcgtactgattctgttcatagcatt
caaacggtccggctgcccatggtagttgaacccaagccttggtcaagttttgaagatggt
ggatactatactgtgccacagaagattgttcgtcaaaaaggtggtgatagtgctcagcgg
gcgtacgctcagctggccatagagaacggtgacatgtccaagataatggctggccttgat
gttctaggaaaggttccctggcagatcaacgctcctgtcttcgatgtaatggctcgtgct
tggaacgctggtgagagcattggatctctagttggtgaggacgccatcacaagtctcaag
cgcccctctgaaccttctgcggaagcttcattccaagaacgatcacgatggaacaaggct
cttcaggagtatgaggacacaattggtggccttcattctcaacggtgctttcaaaacttc
cagcttgagactgctcgagcgtatgccaacgagaaaaagatctacttccctcacagtgtg
gatttccgaggccgggcgtacccaataccacctatccttaaccacattggctcggatctc
tcaagaggtcttcttaaatttgcacatggcaaagagctcggtgctgttggcttgcagtgg
ctgaagatccatcttgccaacttgtacggtttcgacaaggcaagtttgcgagaacgcgag
cagttcgctatggaccacatgagtgagatttgcgattctgcaagtcagcccctagaggga
cagcgatggtggaccaaggccgaagatccgtggcaatgcttggcatgttgcattgaattg
aagaacgctttcgacctacctgatccgacccgctatgtatcacaactgcccgttcatcag
gatggaacctgcaatggactccaacattacgcagccttgggcggcgaccatgctggcgct
cgccaagtcaaccttgagccttcagatagacctcaagacatctataccggtgttgcagag
ctagtaaaagagatggttgctaaagatgccagcaaaggactacctgttgcgaacttcata
gacggttacatttctcgaaaggtcgtcaagcggacggtcatgacgaatgtgtatggtgtc
acgttcatgggagcgaagcaacaggtccaagatgaacttcgcaaccttttcccccatttc
cagcccacggacaaagtgaagtcactcggagtcgtcgctttgtacgtcgcgcaaagaatt
ttcgaagcattgggaaagattttcaacggcgcacaggaaattcaatactggctgggtgaa
tgtggtgatcgtatcacaacctcgatctctgccgaacaaatcaaacggattcaggaacga
tttgagggaacggatcctgcggtggcgctatacgatccaaagtttgctgcccccaaaaag
gtcactacgctccagatcaacaagctaaacaagaatatggagaaattcaagactagcatc
atttggacatccccgctcaagatgcctattgtgcagccgtacagaaaagacactgtccag
aaaatcagaaccaagatccaggacatcaccgtctcaaagaaatcacagcaggatgaggtt
gacaagcgtaaacaactgcaggcatttccccccaactttattcactctctagatgccacc
cacatgacgctgtcggcgttgaaagccaatgaaatgggtctcgattttgcggctgtacat
gacagtttctggacacacgcatctgatatcccaaacctgaacataatccttcgcgacgca
tttgtacgcatgcatagcgaggacatcatcgctcgtcttgctgcagagttctctgcacgc
tatgcaggagcgatgtatcgcgccactgttgtcaacaattcagaggtcggacggaagata
atcaaatggaggatggaaaatcgaagaactggaggaaaagccacaaaagttagtgggttg
gcccgagcggatgctacattcgaagaaattgcattggaggccaagcggcaagagctacta
aagagcggagaccccaagcaaagaaaagaaggtgaagagatggagacacccaccagtata
tggctcgcgaaccaggatccgaaggcacttcattctttccgtctccaactgcttggtgaa
acaaaggaaaacgagtcagcagaacggcaaacggagatcagagacgatgttctggatggg
atagcagagccttgcatcactactgaatcaaccatgcatcttgttgaagatggtgcagaa
gatcttggaaaagatcctgagagtggcggtcttcatgggaagaagaaatcaccatcccgc
attgctgccgataagagcacgattcaggtctgggttcctttggagtttcctcaaatccct
aagaagggtggctgggacgtttctcgtcttcgagaatcaaaatactttttctcttga
DBGET
integrated database retrieval system