KEGG   Bipolaris oryzae: COCMIDRAFT_10106
Entry
COCMIDRAFT_10106  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
bor  Bipolaris oryzae
Pathway
bor03013  Nucleocytoplasmic transport
bor03015  mRNA surveillance pathway
bor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCMIDRAFT_10106
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_10106
   03015 mRNA surveillance pathway
    COCMIDRAFT_10106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_10106
   03041 Spliceosome [BR:bor03041]
    COCMIDRAFT_10106
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     COCMIDRAFT_10106
Spliceosome [BR:bor03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    COCMIDRAFT_10106
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 19117793
NCBI-ProteinID: XP_007693580
JGI: Cocmi1_10106
UniProt: W6Z875
LinkDB
Position
Unknown
AA seq 168 aa
MPALRSTIDRLDKPSSYATAKKRRRDRNTRDEDRARSPSPEDKLKDATTLYVGNLSFYTT
EEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERVIR
TDLDEGFTEGRQYGRGKSGGQVRDEYRAEYDPGRGGYGRAVDEYHEAQ
NT seq 507 nt   +upstreamnt  +downstreamnt
atgcctgcgcttcgaagcacaatcgaccgtctcgacaaaccaagctcatatgcgacagca
aagaagcgcagacgcgatcgtaacacacgcgacgaagaccgcgcccgctcgccctcgccc
gaagataaactcaaagatgcaactacgctctacgtaggcaatctctccttctacaccacc
gaagagcaaatccatgagctcttctcaaaatgcggcgagatcaagcgactagtaatgggc
ctcgatcggttccaaaagacaccctgcgggttctgctttgtcgagtactacacacatcag
gatgcgctcgactgcatgaagtacattggtggcaccaagttggatgagcgcgttatcagg
acagatttggacgagggatttaccgagggacggcagtatggtcgtggaaagagtggtgga
caggtgcgcgatgagtaccgagccgagtatgaccctggacgtggtggctacggaagggcg
gtggacgaataccatgaggcgcagtag

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