Bipolaris oryzae: COCMIDRAFT_103094
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Entry
COCMIDRAFT_103094 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bor
Bipolaris oryzae
Pathway
bor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCMIDRAFT_103094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_103094
03110 Chaperones and folding catalysts [BR:
bor03110
]
COCMIDRAFT_103094
03029 Mitochondrial biogenesis [BR:
bor03029
]
COCMIDRAFT_103094
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bor04147
]
COCMIDRAFT_103094
Enzymes [BR:
bor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
COCMIDRAFT_103094
Messenger RNA biogenesis [BR:
bor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
COCMIDRAFT_103094
Chaperones and folding catalysts [BR:
bor03110
]
Heat shock proteins
HSP60 / Chaperonin
COCMIDRAFT_103094
Mitochondrial biogenesis [BR:
bor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
COCMIDRAFT_103094
Exosome [BR:
bor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCMIDRAFT_103094
Exosomal proteins of other body fluids (saliva and urine)
COCMIDRAFT_103094
Exosomal proteins of breast cancer cells
COCMIDRAFT_103094
Exosomal proteins of colorectal cancer cells
COCMIDRAFT_103094
Exosomal proteins of bladder cancer cells
COCMIDRAFT_103094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
19118219
NCBI-ProteinID:
XP_007690887
JGI:
Cocmi1_103094
UniProt:
W6YT37
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MQRAFASRARTSALNSTSKLRTTSLSLQQQRFAHKELKFGVEARAGLLKGVDTLAKAVST
TLGPKGRNVLIESSYGSPKITKVLDGVTVAKAITLQDKFENLGARLLQDVASKTNEAAGD
GTTTATVLARAIFSETVKNVAAGCNPMDLRRGTQAAVEAVVDYLKANKRDITTSEEIAQV
ATISANGDTHIGKLLSNAMEKVGKEGVITVKEGKTTEDELEVTEGMKFDRGYISPYFITD
TKTAKVEFEKPLILLSEKKISAVQDIVPALEASQQLRRPLVIIAEDIDGEALAVCILNKL
RGQLQVAAVKAPGFGDNRKSILGDLAVLTNGTVFSDDLDIKLEKATPDMLGSTGSITITK
EDTVILNGEGSKDQVSQRCEQIRGVINDPTTSEYEKEKLQERLAKLSGGVAVIKVGGSSE
VEVGEKKDRIVDALNATRAAVEEGILPGGGTGLLKASANALDSVKAHNFDQQLGITIVKN
AITHPARKIVENAGAEGSVIVGKLIDEHKNDFNKGFNSAKGEYVDMIAAGILDPFKVVRT
ALVDASGVASLLGTTEVAIVEAPEEKAGPPGGMPGGMGGMGGMGGMGF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagctttcgcttcgcgggcgcggacttcggccctaaattcgacttctaagctt
cgcaccaccagcttgagcctccagcaacaaagatttgcgcacaaggagctcaagtttggc
gttgaggcacgagcaggactgctcaagggtgtcgacacattggcaaaggctgtatcaaca
acactcggtcccaagggtcgcaacgtattgatcgagtcgagctatggctctcccaagatc
accaaggttttagatggtgtaacggtcgcaaaggccataaccctccaagacaagttcgaa
aaccttggagcccgcctgctccaggatgttgccagcaagaccaacgaggctgctggtgat
ggaaccactaccgctaccgttcttgcccgcgccatcttctccgagactgttaagaacgtt
gccgctggatgcaacccaatggacctgaggcggggtacccaggccgctgtcgaggctgtt
gtcgactacctaaaggcaaacaagagggacattaccaccagcgaggagattgcacaggtt
gcgactatttctgccaatggtgacacacatattggcaagctcctgtccaacgcaatggag
aaggttggaaaggagggtgtcatcaccgtcaaggagggtaagaccaccgaggatgagctg
gaggtcactgagggtatgaagttcgaccgtggttacatctccccttacttcatcaccgac
accaagactgcgaaggtcgagtttgagaagcctctcatcctcctttccgagaagaagatc
tctgctgtccaggacattgtccccgcactcgaggcttcccagcagctccgccgccctctt
gttatcattgccgaggacattgacggcgaagcgcttgctgtctgcattctcaacaagctc
cgtggtcagcttcaagttgctgccgtcaaggcccctggtttcggtgataacaggaagtcc
atcctcggcgatcttgctgtcttaaccaacggtactgtcttcagcgacgatcttgacatt
aagctcgagaaggctactccggacatgctgggttctaccggatccatcaccatcaccaag
gaggacactgtcattctgaacggcgagggcagcaaggaccaggtctcgcagcgttgtgag
cagatccgtggtgtcatcaacgacccgaccacatccgagtacgagaaggagaagcttcag
gagcgtcttgccaagctctctggtggtgttgccgtcatcaaggtcggtggctcctccgag
gttgaggttggcgagaagaaggaccgcatcgttgacgcactcaacgccacccgtgccgct
gtcgaagagggcattctgcctggtggtggtactggtctcctcaaggcttccgccaacgct
ctcgactcggtcaaggcgcacaacttcgaccaacaacttggcataaccattgtcaagaac
gccattacccaccctgcccgcaagattgtcgagaatgctggcgctgagggctctgtcatt
gtaggcaagctcatcgacgagcacaagaacgacttcaacaagggattcaacagcgccaag
ggcgagtacgttgacatgattgcggctggtattctggaccccttcaaggtggttcgcact
gcccttgtcgatgccagcggtgttgcctcgctcctcggtaccactgaggtggccattgtc
gaggcaccagaggagaaggccggccctccaggtggcatgcctggcggcatgggaggcatg
ggcggaatgggcggcatgggcttctaa
DBGET
integrated database retrieval system