Bipolaris oryzae: COCMIDRAFT_103122
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Entry
COCMIDRAFT_103122 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
bor
Bipolaris oryzae
Pathway
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_103122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_103122
Spliceosome [BR:
bor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCMIDRAFT_103122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
19118228
NCBI-ProteinID:
XP_007690910
JGI:
Cocmi1_103122
UniProt:
W6ZGG3
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTMAEKRPYPEGQGPNSDVKRPKPSDAVEAAKARAKAKAAEIAARFAKPAASATPPPPAA
GASDAVQDKLAAMKARMEALKAGSAAAKNPAPDSTGPRFATTLGNRRSETPKVDAKPKAA
VMSQKQPQEEELENPYFDPKTAALAKKRGPRVLSFNEHGKYLDQASKLRAQRRLEEIKKT
LAIQARRAGLDENSERGFLVQPPPDIEWWDEGILAEPNYDCIDDPSKVKVDTDDSIITLY
VQHPPLLKAPQDQRLVQVKPMYLTTKETQKLRRMRRAADLKEHQAKIRLGLEPPPPPKVK
RGNMMRVMGEQAIADPTAVEMLVESQIQQRHDDHVTANEERKLTKEERQAKLAANQEKDA
QKGLYMCVFKVNTLAYGKHRFQIDSNAKEHALTGITLFNPDLNLVVVEGGAYAINKYKKL
MLQRIKWHENGPPTENQMEKQASDPQWLRPLTDAGDIKDHSSNKCTLIFEGEIKERSFRK
WGSRVCETAGEARETLGRAKLDSLWALAKSIE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggctgagaagcgtccctatcccgaggggcagggtccgaatagcgatgtgaag
cgcccgaaaccatcagatgctgtcgaagctgcgaaggccagagcgaaagcaaaggccgcc
gaaattgcagcccgattcgcgaagcccgctgcctctgcaacccccccaccgccggcggct
ggggcaagcgatgcggttcaggacaaactggcagccatgaaggcaaggatggaggcgctc
aaggcaggctcggcagcagccaaaaaccccgctcctgattccacaggcccacgctttgcg
acaaccctgggcaaccgtcgctcagaaacgcccaaggttgatgcgaaacccaaggccgct
gtgatgagccaaaaacaaccgcaagaagaagagctagagaacccatactttgaccccaag
accgctgccctagccaagaagaggggcccccgtgtactctcgttcaacgaacacggaaag
tacctcgaccaggcctcgaagttgcgcgcacaacggcgactcgaggagattaaaaagacg
ctcgccatccaagcccgccgcgctggtcttgatgaaaatagcgagcgcggttttctggtc
cagccccctccggatatcgaatggtgggacgagggtatcctggctgagcccaactacgat
tgcatcgacgacccgtccaaagtcaaggttgacaccgatgattccatcataacactatat
gttcaacatccgccactgctcaaagcgccccaagatcagcgtctggtccaggttaagccc
atgtatcttaccactaaagaaacacagaagctacgtaggatgcgccgtgctgcagacctc
aaagaacaccaggctaaaattcgtcttggtttggaaccgcctccaccacccaaggtcaag
cgtggaaacatgatgcgtgtcatgggagagcaggccattgcagaccctacggctgttgag
atgctcgtcgaatcgcagatccagcagcgtcatgacgaccacgttacagcaaatgaagag
cgcaagttgaccaaagaagaaagacaagcgaagcttgctgcgaaccaagaaaaggatgcg
caaaagggactatatatgtgtgtcttcaaagtcaatactctggcatatggcaagcaccgc
ttccagattgacagcaacgccaaggagcatgcccttactggaattacactgttcaatccc
gatctgaatctggtcgtagttgaaggaggcgcatatgcaatcaacaagtacaagaagctc
atgctccagcgtatcaagtggcacgagaatggtccacccacagagaaccagatggagaag
caagcttcggatccgcaatggctgagaccgctcaccgacgccggggatatcaaggaccac
tcgtccaacaagtgtacgctcatcttcgagggcgagatcaaggagcgatctttccgaaag
tggggctcaagggtatgcgagaccgctggtgaagctcgcgagacacttggccgcgccaag
ctcgacagcttgtgggcgcttgctaaaagcatcgaatga
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