Bipolaris oryzae: COCMIDRAFT_103719
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Entry
COCMIDRAFT_103719 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
bor
Bipolaris oryzae
Pathway
bor03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCMIDRAFT_103719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_103719
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_103719
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
COCMIDRAFT_103719
RNA polymerase I system
COCMIDRAFT_103719
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
COCMIDRAFT_103719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Ig_TMEM132_5th
Motif
Other DBs
NCBI-GeneID:
19118362
NCBI-ProteinID:
XP_007691130
JGI:
Cocmi1_103719
UniProt:
W6Z3Z3
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MAGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFE
GLITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGINYVPRDGSEQDM
MPKD
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggcgcgtacatccccccaaaccagcagcgcaacatgcgcgcctgcatggtc
tgctccattgtccgcacccagcagcagttcctgtcccagggctgccccaactgcgaagag
tttctcgagctcaccggcaacccggagcagatcaacgactgtacctcgcaagtctttgag
ggtctcatcaccgtcgcagacaccaccaagagctgggtggccaggtaccagcgcctcgag
ggttaccagccgggtgtgtacgcgacccaggtcgagggtatcctccccgacgacattatt
ggcttgatcgagagcgccggcatcaactacgtaccaagagatggcagcgagcaggatatg
atgcccaaggattaa
DBGET
integrated database retrieval system
