Bipolaris oryzae: COCMIDRAFT_1039
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Entry
COCMIDRAFT_1039 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_1039
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
COCMIDRAFT_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
19118400
NCBI-ProteinID:
XP_007683125
JGI:
Cocmi1_1039
UniProt:
W6ZJW9
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MSAPQIARPGRAPRLPSLNKPDSYQYQSSATKRRAAGPPQPVKPTQRTYTCCETPLITSA
DGTVMCYNCGKVHDESQIVSEVTFGETSGGAAIVEGGFIHANQRHANSMGGTMRGLGGME
SREQAAMNGKNAIQALGASLNQREAVIEQAFSWYKLAMNHRFIQGRRMRNVAAVSIYMAA
RRQPENTLMLIDLAEKIQTNVWALGDTYKQFLEMLKEEDPAQLVGSKAVQEIEPLMLKYC
RKLEFGDDSHRVADDACKVLKRMNRDWMVQGRQPAGLCGACIIIAARMNNFRRTIREVVY
VVKVADSTITSRLYEYKRTQSAALTVNQFREFAPRLKVKAQPPAIWRRAEKEERQAKRRR
RLEGHDDSAASLENDSGNGEVETGTATAPTRTSKRRKSNDGSSQPVSTQSGDTSTQGTSI
PAEVEAFDGNADAMIDSVATALEEVEAGEATDPDFVMPKKRGRPSKKRVPIVIPEEDLEI
EQDIEEELTNAIKDWEAIFKEFANNEDHDLLRRSGWTAAEMARAAQDKRDTPINTDPEIG
EEEFEDDPDVATCILGPEEVRRKEAIWITENEEWLRAQQEKMLLAELEAAEDKPKKPKQK
RKHHQMGDGSVLEGQPATSAADAAHKMLKKRANKAFSNHINYDRLKELFPGGGTNTSASP
ADSAQGTSPVNRSPPASSAATTVQHPVADADAEGDEEEEEEEEEEEMLAEEEEEDLEYNY
RDDDDEGFGNESYDY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccccagattgcgaggccgggcagggccccgcgcctccccagcctgaacaaa
cccgattcctaccagtaccagtcctctgcaacaaaacgaagagccgccggcccaccccag
cccgtaaaacccacccagcgcacctacacgtgctgcgaaacacccttgatcacttccgcc
gacggcaccgtcatgtgctacaactgcggaaaagtccacgacgagagccaaattgtttcc
gaagtcacttttggcgaaacttcgggcggcgcagccatcgtcgagggcgggttcatccat
gccaaccagcgacatgccaactccatgggcggcaccatgaggggtcttggtggcatggag
agcagggagcaggctgccatgaacggaaagaacgctatccaagccctgggcgcttctctc
aaccagcgcgaggcagtcatagaacaggcttttagttggtacaaactcgccatgaaccac
cggtttatccagggtcgccgcatgaggaacgtcgccgcagtctccatatacatggcagct
cgtaggcagcccgagaacactctcatgcttatcgacttggcggagaagattcaaacaaac
gtctgggccttgggtgatacatacaagcagtttttggaaatgctcaaagaggaggatcct
gcccagctcgttggtagcaaggctgtacaggagattgagcctttgatgttgaagtactgc
cggaaactagagtttggagacgactctcatagggtagctgatgatgcctgcaaggtcttg
aagcgcatgaatcgcgattggatggtgcaaggtcgccagcccgctggattgtgtggtgct
tgtattatcattgctgctcgcatgaacaactttcgccgtaccatccgtgaagttgtctat
gttgtcaaggtcgccgattccaccattacttcccgcttgtacgagtacaagaggacacag
agtgcagccttgacggtcaatcaatttcgagagtttgcgccaagactaaaagttaaggct
caaccgcccgccatctggaggcgcgcagagaaggaggagcgacaggcgaagaggaggaga
cggcttgaaggacatgatgatagtgcggcatctctagagaacgattcaggaaatggtgaa
gtggagaccggcacagctacagcaccaacacggacgagcaagagacgaaagtctaatgat
ggctcgtcacaaccagtttctactcaaagcggagacacaagcactcaaggaaccagcata
cctgcagaagtcgaggcctttgatggcaatgccgacgcaatgattgatagcgtcgccact
gcgcttgaggaagtcgaagcaggcgaggctactgatccagactttgtcatgcccaagaag
cgtggtcgtccatcaaagaagcgagttcccatcgtcattcccgaagaagatctcgaaatc
gagcaagacattgaggaagaactcaccaatgccatcaaggactgggaggctatcttcaaa
gaattcgccaacaacgaagaccacgatctcctccgacgctccggctggaccgccgccgaa
atggcccgcgccgcccaagacaagcgcgacacccccatcaacacagaccccgaaatcggc
gaagaagaattcgaagacgatccagacgtcgccacgtgcatcctcggccccgaagaagtc
cggcgcaaagaagccatctggatcaccgaaaacgaagaatggctccgcgcccagcaagaa
aagatgcttctcgccgaactcgaagccgcagaagacaagcccaagaaaccgaagcaaaaa
cgcaaacaccaccaaatgggcgacggcagcgtccttgagggccaacccgctaccagcgct
gcagacgccgcccacaagatgctcaagaaacgcgcgaataaagcctttagcaaccacatc
aattacgacaggcttaaagaacttttcccaggtggtggaacaaacacttcggctagtccc
gcagatagtgcccaaggtactagtcccgtgaataggtctccgcctgcttcttctgctgct
actactgtccagcatcctgttgcggatgcggatgcggagggtgatgaagaggaggaggaa
gaggaagaggaagaggaaatgctagcggaagaggaggaagaggatctcgagtataactat
cgagatgatgatgatgaggggtttggcaatgagagttatgactactag
DBGET
integrated database retrieval system
