Bipolaris oryzae: COCMIDRAFT_104010 Help Entry COCMIDRAFT_104010 CDS       T03125                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism bor  Bipolaris oryzae Pathway bor03020   RNA polymerase bor03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:bor00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     COCMIDRAFT_104010   09124 Replication and repair    03420 Nucleotide excision repair     COCMIDRAFT_104010  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bor03021]     COCMIDRAFT_104010    03400 DNA repair and recombination proteins [BR:bor03400]     COCMIDRAFT_104010 Enzymes [BR:bor01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      COCMIDRAFT_104010 Transcription machinery [BR:bor03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      COCMIDRAFT_104010 DNA repair and recombination proteins [BR:bor03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       COCMIDRAFT_104010 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  19118423 NCBI-ProteinID:  XP_007691243 JGI:  Cocmi1_104010 UniProt:  W6YXH7 LinkDB All DBs Position Unknown AA seq 1262 aa AA seqDB search MAEPYEYEDGMDDYEDEEDDRVLPEDCWAVISSFFDTKGLVSQQLDSYDEFTRNTIQDIV KENGSVILEQNTPYNPDEDDNPIIKRRYEIKFGRVYLARPTHTEGDGTTVQLYPHEARLR NLTYSGAMLADIENRIMVAREGRDPEGDEDEDMEGGYTGGASQIRWEREDMPMDDGTAAR VFIGKLPVMLRSELCHLRAQSDADLFALNECPYDQGGYFVINGSEKVLIAQERSAANIVQ VFRKKQGPIPWIAEIRSAVEKGTRLISSFNIKWAENSLAGPGKRIPGPFAYATLPYIKAD VPMAIVFRALGIVSDEEILSHIVYDRTDTQMLELLKPSIEEGSVVQDRETALDFIAKRGA NSGTKDRRLKFARDIMQREFLPHISQKEGQDTRKAYFFGYMIHRLLQCVLGRRDEDDRDH FGKKRLDLAGPLIANLFRILFLKLTKDVYKYLQRCVENNQDFNVQMAVKASIITNGLKYS LATGNWGDQKKAASAKAGVSQVLNRYTYASTLSHLRRTNTPVGRDGKLAKPRQLHNSHWG LVCPAETPEGQACGLVKNLSLMCYVSVGSDASPIIDFMTQRNMQLLEEYDQNQNPDATKV FVNGVWVGVHSNAQQLVTVVQELRRNGTLSYEMSLIRDIRDREFKIFTDAGRVMRPLFVV ENDIRKPNRNHLIFTKEISNKLKAEQQETSTRQGWSQEEVEQATYGWRGLIQDGVVEYLD AEEEETAMITFSPEDLEEWREMKMGLPAAERSTEGKDRLRRLKPQPDPRIHAYTHCEIHP AMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVALTNFALRMETMMNVLYYPQKPLAT TRSMEYLKFRELPAGQNAIVAIATYGGYNQEDSVIMNQSSIDRGLFRSLFYRAYTEQEKR IGVNVLEQFEKPTRADTLRLKGGTYDKLDDDGVVAPGVRVSGDDIIIGKTAPIAADAQEL GQKTTLHTKRDVSTPLRSTENGIVDQVLFTTNTEGLRFVKVRTRTTKIPQIGDKFASRHG QKGTIGITYRQEDMPFTREGVTPDLIINPHAIPSRMTIAHLVECLLSKVGAITGQEGDAT PFTDVTVDQISQLLEDAGYQKRGFEIMYNGHTGKKLRTQIFLGPTYYQRLRHMVDDKIHA RARGPLQILTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFTVSDAYTVHVCDI CGLMSPIAQLKKGLYECRPCHNKTRVSQIHIPYAAKLLFQELLAMNIATRMFTDRSGLSV RD NT seq 3789 nt NT seq  +upstreamnt  +downstreamnt atggctgagccgtacgagtacgaagacggaatggacgactacgaggatgaggaggacgac cgcgtcctgcccgaagactgctgggcagttatcagctccttcttcgacaccaagggtctg gtgtcgcaacaactggattcctatgacgaatttacgcgcaacacaatacaagatatcgta aaagaaaacggaagtgtcattctggaacagaacacgccctacaaccctgacgaggatgat aacccgattatcaagcgccgctatgagatcaagtttggacgtgtctatcttgcacgacca acacacactgaaggagacggtaccactgtgcagctctacccacacgaggcgcgtctgcga aacctcacttactccggagccatgttggctgacattgaaaaccgcatcatggtcgctcgt gaaggccgtgaccccgagggcgatgaggacgaagacatggagggtggatacacaggaggt gcttcacaaattcggtgggaacgtgaagatatgcccatggacgacggtactgcggcgagg gttttcatcggaaagctgcccgtcatgttgcggtcagagctttgccacctgcgagcacaa tcagacgctgatttgtttgcgctgaacgaatgcccctacgatcagggtggatacttcgtc atcaacggcagtgagaaggtgctgatcgcccaggagcgcagtgccgccaacattgtacaa gtcttccgcaagaagcagggacctattccttggatagcagagattcgaagtgctgtcgaa aagggcactcgtcttatctcttcctttaacatcaaatgggcagaaaactcgctcgctggc ccgggcaagcgtatacccggtccattcgcatacgccaccctcccatatatcaaggcagat gtgcccatggccattgtcttccgtgcgcttggtatagtttccgatgaggagattctgagt cacatcgtttacgaccgtaccgacacacaaatgctggagctgttgaagcccagtatcgag gagggttccgttgtgcaggaccgtgagactgccctcgacttcatcgccaaacgtggagca aactctggtaccaaggacaggcgtctcaagtttgcgagggacatcatgcagcgcgagttc ctgccgcatatctcccaaaaggaaggtcaggatacccgcaaggcctatttcttcggttac atgatccacagacttttgcagtgtgtgttgggtcgccgtgatgaggatgaccgtgatcac ttcggaaagaagcgactggatcttgcgggacctttgattgccaacttgttccgtatcctc ttcctgaagctcacaaaagacgtgtataagtaccttcagcggtgtgtcgagaacaaccag gactttaacgttcagatggctgtaaaagccagtatcatcacaaacggtctgaagtactct ctggctacaggtaactggggtgatcagaagaaggccgcctccgcaaaggctggtgtctcg caggtgttgaaccgatacacctacgcttctactctatcccatcttcgtcgaacaaacacc cccgttggacgtgatggtaaactggccaagccccgccaactccacaactctcattggggt cttgtctgccctgccgagacgcctgaaggacaagcttgcggactggtcaagaacttgtct ctcatgtgctacgtcagtgtcggtagcgatgcatcccccattatcgactttatgacgcaa cgtaacatgcagcttcttgaggaatacgaccagaatcagaacccggatgcgacaaaggtt ttcgtgaacggtgtatgggtcggtgttcactccaacgctcagcaacttgtcacagttgtg caggagctccgacggaatggaactctatcttacgagatgagtttgattcgtgatattcgt gaccgagagttcaagatcttcacggatgctggccgtgtcatgagacctctgttcgtggtt gagaacgatatcagaaagccaaaccgaaatcacctcatcttcaccaaggaaatcagtaac aagctcaaggccgagcagcaagagactagcacacggcaaggctggagccaagaggaggtg gaacaggccacctacggctggagaggtctgattcaagacggtgttgtcgaatatctcgat gccgaagaagaggaaaccgccatgataacgttctcgcccgaagatttggaggaatggcga gagatgaagatgggtttgcctgcagccgagcgatctaccgagggcaaggaccgactccgt cgtctcaagccccagccagatcctcgcattcacgcctatacccattgcgagattcatccg gccatgatcttgggtatctgtgccagtattattcccttcccagatcacaaccagtcgccc cgtaacacgtaccaatctgccatgggtaagcaagccatgggtgttgctctcaccaacttt gcgctccgtatggaaaccatgatgaacgtcctctactacccccagaagcctttggcgaca accaggtcgatggagtacctcaagttccgtgagcttcccgctggacagaatgccattgtc gctattgctacctatggtggttacaaccaggaagattccgtcatcatgaaccagagcagt attgatcgtggtctcttcaggagtttattctaccgtgcgtacactgaacaagagaagcgc atcggtgtcaacgtcctggaacagttcgagaaacctacgcgtgctgacactcttcgtttg aagggtggtacctatgacaagctcgacgatgacggtgttgtcgcgcctggtgtacgtgtg tccggtgacgatatcatcatcggaaagactgcgcccatcgcggcagacgcccaggagctt ggtcagaagactactctgcacaccaagcgagatgtttcaacgcctcttcgtagtaccgag aacggtatcgtcgatcaggtgctcttcaccaccaacaccgaaggtcttcgattcgtcaag gtccgtaccaggactaccaagatacctcaaattggtgacaagtttgcttctcgtcacggt caaaagggtactattggtatcacctaccgccaagaggatatgccttttactcgagaggga gtgacaccagatctaatcatcaaccctcacgccatcccttctcgtatgacaattgcccat ttggtcgaatgtctgctatccaaggtcggtgccatcaccggacaagagggtgacgccaca cccttcaccgacgtcacggtcgatcaaatctcccagctgctcgaagacgccggctaccag aagcgtgggtttgaaatcatgtacaacggtcacactggtaaaaagttgcgtacgcaaatc ttcttgggtcccacatactaccagcgtctccgccacatggtcgacgacaagatccacgct cgtgcccgcggccccctccagattctcacccgccagcccgtcgaaggtcgtgccagagat ggtggtctccgtttcggagagatggaacgtgattgtatgattgcccacggtgccgctgcc ttcctcaaggaacgtctctttaccgtctctgacgcatacaccgtccacgtatgcgacatt tgcggtctgatgagtcctattgcccaactcaaaaagggcctctacgaatgccgtccttgc cacaacaaaacccgcgtttcacaaatccacatcccttacgccgcaaaactgctcttccaa gaactcctcgctatgaacattgcgacccgcatgtttacagatcgttcgggtctcagcgtg cgtgactag

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